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Protein

Pyridoxal kinase

Gene

DSY1521

Organism
Desulfitobacterium hafniense (strain Y51)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

Catalytic activityi

ATP + pyridoxal = ADP + pyridoxal 5'-phosphate.SAAS annotation

Pathwayi: pyridoxal 5'-phosphate salvage

This protein is involved in step 1 of the subpathway that synthesizes pyridoxal 5'-phosphate from pyridoxal.SAAS annotation
Proteins known to be involved in this subpathway in this organism are:
  1. Pyridoxal kinase (DSY1521)
This subpathway is part of the pathway pyridoxal 5'-phosphate salvage, which is itself part of Cofactor metabolism.
View all proteins of this organism that are known to be involved in the subpathway that synthesizes pyridoxal 5'-phosphate from pyridoxal, the pathway pyridoxal 5'-phosphate salvage and in Cofactor metabolism.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

KinaseSAAS annotation, Transferase

Keywords - Ligandi

ATP-bindingSAAS annotation, MagnesiumSAAS annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciDHAF138119:GHT5-1571-MONOMER.
UniPathwayiUPA01068; UER00298.

Names & Taxonomyi

Protein namesi
Recommended name:
Pyridoxal kinaseSAAS annotation (EC:2.7.1.35SAAS annotation)
Gene namesi
Ordered Locus Names:DSY1521Imported
OrganismiDesulfitobacterium hafniense (strain Y51)Imported
Taxonomic identifieri138119 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesPeptococcaceaeDesulfitobacterium
Proteomesi
  • UP000001946 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi138119.DSY1521.

Structurei

3D structure databases

ProteinModelPortaliQ24XD2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini74 – 259186Phos_pyr_kinInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG4108K05. Bacteria.
COG2240. LUCA.
HOGENOMiHOG000113253.
KOiK00868.
OMAiPIMADKG.
OrthoDBiEOG66F095.

Family and domain databases

Gene3Di3.40.1190.20. 1 hit.
InterProiIPR013749. PM/HMP-P_kinase-1.
IPR004625. PyrdxlP_synth_PyrdxlKinase.
IPR029056. Ribokinase-like.
[Graphical view]
PANTHERiPTHR10534. PTHR10534. 1 hit.
PfamiPF08543. Phos_pyr_kin. 1 hit.
[Graphical view]
SUPFAMiSSF53613. SSF53613. 1 hit.

Sequencei

Sequence statusi: Complete.

Q24XD2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTMERQKRVA AIHDISCVGR CSLTVALPIL SAAGFDTGVL PTAVLSTHTG
60 70 80 90 100
GFEGFTYRDL TEDIEPIAKH WQSLDLKFDA LYSGFLGSFA QIDLVADLFK
110 120 130 140 150
TFRKDDTLVM VDPVMADNGV LYSVYSPEMA KGMAKLCSMA DIIVPNLTEA
160 170 180 190 200
AFMLEEDYVG DKYSQDYVEK ILRKLSDMGA KKVVLTGISF DPAQLGAACY
210 220 230 240 250
DRETDQVSYA FNERVEGYFH GTGDVFGSTL LSGLLNNFSL AEATQIAVDY
260 270 280
TLKCIQLTVA GNQERRYGVC FERALPYLIQ KLGLLK
Length:286
Mass (Da):31,523
Last modified:April 18, 2006 - v1
Checksum:i258A3C9A038CA418
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008230 Genomic DNA. Translation: BAE83310.1.

Genome annotation databases

EnsemblBacteriaiBAE83310; BAE83310; DSY1521.
KEGGidsy:DSY1521.
PATRICi21671485. VBIDesHaf65307_1686.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008230 Genomic DNA. Translation: BAE83310.1.

3D structure databases

ProteinModelPortaliQ24XD2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi138119.DSY1521.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAE83310; BAE83310; DSY1521.
KEGGidsy:DSY1521.
PATRICi21671485. VBIDesHaf65307_1686.

Phylogenomic databases

eggNOGiENOG4108K05. Bacteria.
COG2240. LUCA.
HOGENOMiHOG000113253.
KOiK00868.
OMAiPIMADKG.
OrthoDBiEOG66F095.

Enzyme and pathway databases

UniPathwayiUPA01068; UER00298.
BioCyciDHAF138119:GHT5-1571-MONOMER.

Family and domain databases

Gene3Di3.40.1190.20. 1 hit.
InterProiIPR013749. PM/HMP-P_kinase-1.
IPR004625. PyrdxlP_synth_PyrdxlKinase.
IPR029056. Ribokinase-like.
[Graphical view]
PANTHERiPTHR10534. PTHR10534. 1 hit.
PfamiPF08543. Phos_pyr_kin. 1 hit.
[Graphical view]
SUPFAMiSSF53613. SSF53613. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of the dehalorespiring bacterium Desulfitobacterium hafniense Y51 and comparison with Dehalococcoides ethenogenes 195."
    Nonaka H., Keresztes G., Shinoda Y., Ikenaga Y., Abe M., Naito K., Inatomi K., Furukawa K., Inui M., Yukawa H.
    J. Bacteriol. 188:2262-2274(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Y51Imported.

Entry informationi

Entry nameiQ24XD2_DESHY
AccessioniPrimary (citable) accession number: Q24XD2
Entry historyi
Integrated into UniProtKB/TrEMBL: April 18, 2006
Last sequence update: April 18, 2006
Last modified: April 13, 2016
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.