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Unreviewed, UniProtKB/TrEMBL Q24WL3 (Q24WL3_DESHY)

Last modified February 9, 2010. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesSubmitted name:
    Putative uncharacterized protein EMBL BAE83579.1
Gene names
Ordered Locus Names: DSY1790
OrganismDesulfitobacterium hafniense (strain Y51) [Complete proteome] [HAMAP]
Taxonomic identifier138119 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Clostridia › Clostridiales › Peptococcaceae › Desulfitobacterium

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Protein attributes

Sequence length206 AA.
Sequence statusComplete.
Protein existencePredicted.

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General annotation (Comments)

Sequence similarities

Contains 1 RNase H domain.

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Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular componentinclusion body

Inferred from electronic annotation. Source: InterPro

   Molecular functionnucleic acid binding

Inferred from electronic annotation. Source: InterPro

ribonuclease H activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

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Sequences

Sequence LengthMass (Da)Tools
Q24WL3-1 [UniParc].

Last modified April 18, 2006. Version 1.
Checksum: 1A8744733E6C3F72

FASTA20623,184
        10         20         30         40         50         60 
MGIHKPKFYA VRAGRDKGVF SSWEECRKAI YGFSGAVYRS FPTLEEAQAW FKGETLSDPL 

        70         80         90        100        110        120 
KAEDDSLRDD RTEYDVYTDG SYVNGQYAWA YAFVKDGKVH YEDADVGKNP AAATMRNVAG 

       130        140        150        160        170        180 
EIAAALYAVK KASQLGVKIR ILHDYAGIAF WATGEWKAKN EFTQAYAKLM NQYRGIYSFE 

       190        200 
KVKAHSGNEF NDYVDMKAKS ALGIRD

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References

[1]"Complete genome sequence of the dehalorespiring bacterium Desulfitobacterium hafniense Y51 and comparison with Dehalococcoides ethenogenes 195."
Nonaka H., Keresztes G., Shinoda Y., Ikenaga Y., Abe M., Naito K., Inatomi K., Furukawa K., Inui M., Yukawa H.
J. Bacteriol. 188:2262-2274(2006) [PubMed: 16513756] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP008230 Genomic DNA. Translation: BAE83579.1.
RefSeqYP_518023.1.

3D structure databases

SMRQ24WL3. Positions 7-51, 74-202.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ24WL3.

Genome annotation databases

GeneID3954816.
GenomeReviewsGene locus DSY1790 in contig AP008230_GR.
KEGGdsy:DSY1790.
NMPDRfig|138119.3.peg.1790.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3341.
HOGENOMHBG425415.
OMAKYNDLAD.

Enzyme and pathway databases

BioCycDHAF138119:DSY1790-MONOMER.

Family and domain databases

InterProIPR012337. PolynucTfrase_RNaseH_fold.
IPR009027. Ribosomal_L9/RNase_H1_N.
IPR002156. RNase_H.
IPR011320. RNase_H1_N.
[Graphical view]
Gene3DG3DSA:3.40.970.10. RNase_HI_N. 1 hit.
PfamPF00075. RnaseH. 1 hit.
[Graphical view]
PROSITEPS50879. RNASE_H. 1 hit.
[Graphical view]
ProtoNetSearch...

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Entry information

Entry nameQ24WL3_DESHY
AccessionPrimary (citable) accession number: Q24WL3
Entry history
Integrated into UniProtKB/TrEMBL: April 18, 2006
Last sequence update: April 18, 2006
Last modified: February 9, 2010
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information