Q24WL3 (Q24WL3_DESHY) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL BAE83579.1

Gene names

Ordered Locus Names:

DSY1790

Organism

Desulfitobacterium hafniense (strain Y51) [Complete proteome] [HAMAP]

Taxonomic identifier

138119 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Peptococcaceae › Desulfitobacterium

Protein attributes

Sequence length	206 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Technical term	3D-structure PDB 2KW4 Complete proteome
Gene Ontology (GO)
Molecular function	nucleic acid binding Inferred from electronic annotation. Source: InterPro ribonuclease H activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q24WL3 [UniParc]. Last modified April 18, 2006. Version 1. Checksum: 1A8744733E6C3F72	FASTA	206	23,184
	10 20 30 40 50 60 MGIHKPKFYA VRAGRDKGVF SSWEECRKAI YGFSGAVYRS FPTLEEAQAW FKGETLSDPL 70 80 90 100 110 120 KAEDDSLRDD RTEYDVYTDG SYVNGQYAWA YAFVKDGKVH YEDADVGKNP AAATMRNVAG 130 140 150 160 170 180 EIAAALYAVK KASQLGVKIR ILHDYAGIAF WATGEWKAKN EFTQAYAKLM NQYRGIYSFE 190 200 KVKAHSGNEF NDYVDMKAKS ALGIRD

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete genome sequence of the dehalorespiring bacterium Desulfitobacterium hafniense Y51 and comparison with Dehalococcoides ethenogenes 195." Nonaka H., Keresztes G., Shinoda Y., Ikenaga Y., Abe M., Naito K., Inatomi K., Furukawa K., Inui M., Yukawa H. J. Bacteriol. 188:2262-2274(2006) [PubMed: 16513756] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Y51.
[2]	"Northeast Structural Genomics Consortium Target DhR1A." Mills J.L., Eletsky A., Hua J., Belote R.L., Buchwald W.A., Ciccosanti C., Janjua H., Nair R., Rost B., Acton T.B., Xiao R., Everett J.K., Montelione G.T., Szyperski T. Submitted (MAR-2010) to the PDB data bank Cited for: STRUCTURE BY NMR OF 69-206.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AP008230 Genomic DNA. Translation: BAE83579.1.

RefSeq

YP_518023.1. NC_007907.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
2KW4	NMR	-	A	69-206	[»]

ProteinModelPortal

Q24WL3.

ModBase

Search...

Protein-protein interaction databases

STRING

Q24WL3.

Protocols and materials databases

DNASU

3954816.

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

GeneID

3954816.

GenomeReviews

Gene locus DSY1790 in contig AP008230_GR.

KEGG

dsy:DSY1790.

PATRIC

21672086. VBIDesHaf65307_1989.

Organism-specific databases

CMR

Search...

Phylogenomic databases

eggNOG

COG3341.

HOGENOM

HOG000056288.

KO

K03469.

OMA

ISIHENG.

ProtClustDB

CLSK2465972.

Family and domain databases

Gene3D

G3DSA:3.40.970.10. RNase_HI_N. 1 hit.

InterPro

IPR009027. Ribosomal_L9/RNase_H1_N.
IPR011320. RNase_H1_N.
IPR012337. RNaseH-like_dom.
IPR002156. RNaseH_domain.
[Graphical view]

Pfam

PF01693. Cauli_VI. 1 hit.
PF00075. RNase_H. 1 hit.
[Graphical view]

SUPFAM

SSF55658. L9_N_like. 1 hit.
SSF53098. RNaseH_fold. 1 hit.

PROSITE

PS50879. RNASE_H. 1 hit.
[Graphical view]

ProtoNet

Search...

Other

EvolutionaryTrace

Q24WL3.

Entry information

Entry name

Q24WL3_DESHY

Accession

Primary (citable) accession number: Q24WL3

Entry history

Integrated into UniProtKB/TrEMBL:	April 18, 2006
Last sequence update:	April 18, 2006
Last modified:	May 16, 2012
This is version 40 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)