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Q24SM1 (Q24SM1_DESHY) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:DSY3182
OrganismDesulfitobacterium hafniense (strain Y51) [Complete proteome] [HAMAP]
Taxonomic identifier138119 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesPeptococcaceaeDesulfitobacterium

Protein attributes

Sequence length475 AA.
Sequence statusComplete.
Protein existenceInferred from homology

Sequences

Sequence LengthMass (Da)Tools
Q24SM1 [UniParc].

Last modified April 18, 2006. Version 1.
Checksum: 67898B07EC5D2A16

FASTA47551,446
        10         20         30         40         50         60 
MVRKEKDLLG VMEVPEDVYY GIQTLRAREN FPITGYRPHH ELIRGLGLVK AAAAQANMDI 

        70         80         90        100        110        120 
GSLNHEIGEA VIKASLEVAE GAFNDHFVVD VIQGGAGTSI NMNANEVIAN RAIEILGGRK 

       130        140        150        160        170        180 
GDYSRVHPNV HVNMAQSTND VFPTAIRIAC LNVADDLLHA LNELKSAFQE KAREFDGVIK 

       190        200        210        220        230        240 
MGRTHLQDAV PIRLGQEFAA YGQMLERDLR RITEAAKSLH SINMGATAVG TGLNADPIYI 

       250        260        270        280        290        300 
EEVSENLRKV TGLPLLRADN LVDATQNTDA FLEVSGALKT LAVNLSKIAN DLRLMASGPR 

       310        320        330        340        350        360 
TGFGEINLPA MQPGSSIMPG KVNPVMAEVV NQVSFQVQGN DFTIALACGA GQLELNVMEP 

       370        380        390        400        410        420 
VVVFNLLQSL DILRNVIKVF KERCVDGITA NVERCRDLVE NSVGVVTAIN PHVGYEVASR 

       430        440        450        460        470 
IAKEAIVTGR PVREIVLERG LLTSEELDLI LNPHEMTNPG ISGSELLKGV LPRGH 

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References

[1]"Complete genome sequence of the dehalorespiring bacterium Desulfitobacterium hafniense Y51 and comparison with Dehalococcoides ethenogenes 195."
Nonaka H., Keresztes G., Shinoda Y., Ikenaga Y., Abe M., Naito K., Inatomi K., Furukawa K., Inui M., Yukawa H.
J. Bacteriol. 188:2262-2274(2006) [PubMed: 16513756] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP008230 Genomic DNA. Translation: BAE84971.1.
RefSeqYP_519415.1. NC_007907.1.

3D structure databases

ProteinModelPortalQ24SM1.
SMRQ24SM1. Positions 2-463.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ24SM1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3956933.
GenomeReviewsGene locus DSY3182 in contig AP008230_GR.
KEGGdsy:DSY3182.
NMPDRfig|138119.3.peg.3293.
PATRIC21675252. VBIDesHaf65307_3558.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1027.
HOGENOMHBG284369.
OMAEGITANE.
PhylomeDBQ24SM1.
ProtClustDBPRK12273.

Family and domain databases

HAMAPMF_00743. FumaraseC.
[Tree]
InterProIPR004708. ApsA.
IPR003031. D_crystallin.
IPR005677. Fum_hydII.
IPR018951. Fumarase_C_C.
IPR000362. Fumarate_lyase.
IPR020557. Fumarate_lyase_CS.
IPR008948. L-Aspartase-like.
IPR024083. L-Aspartase-like_N.
IPR022761. Lyase1_N.
[Graphical view]
Gene3DG3DSA:1.10.275.10. G3DSA:1.10.275.10. 1 hit.
KOK01744.
PfamPF10415. FumaraseC_C. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSPR00145. ARGSUCLYASE.
PR00149. FUMRATELYASE.
SUPFAMSSF48557. L-Aspartase-like. 1 hit.
TIGRFAMsTIGR00839. AspA. 1 hit.
PROSITEPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ24SM1_DESHY
AccessionPrimary (citable) accession number: Q24SM1
Entry history
Integrated into UniProtKB/TrEMBL: April 18, 2006
Last sequence update: April 18, 2006
Last modified: December 14, 2011
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)