Q24JY1 (RL23A_BOVIN) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
60S ribosomal protein L23a

Gene names

Name:

RPL23A

Organism

Bos taurus (Bovine)

Taxonomic identifier

9913 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Laurasiatheria › Cetartiodactyla › Ruminantia › Pecora › Bovidae › Bovinae › Bos

Protein attributes

Sequence length	156 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Evidence at transcript level

General annotation (Comments)

Function	This protein binds to a specific region on the 26S rRNA By similarity.
Post-translational modification	N-terminus is methylated by METTL11A/NTM1 By similarity.
Sequence similarities	Belongs to the ribosomal protein L23P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
PTM	Acetylation Methylation Phosphoprotein
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	nucleus Inferred from sequence or structural similarity. Source: UniProtKB ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	nucleotide binding Inferred from electronic annotation. Source: InterPro rRNA binding Inferred from electronic annotation. Source: UniProtKB-KW structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Initiator methionine	1	1	Removed By similarity
	Chain	2 – 156	155	60S ribosomal protein L23a		PRO_0000240144
Amino acid modifications
	Modified residue	2	1	N,N,N-trimethylalanine By similarity
	Modified residue	43	1	Phosphoserine By similarity
	Modified residue	70	1	N6-acetyllysine By similarity

Sequences

	Sequence		Length	Mass (Da)
	Q24JY1 [UniParc]. Last modified April 18, 2006. Version 1. Checksum: 3980E77B47FAB70E	FASTA	156	17,695
	10 20 30 40 50 60 MAPKAKKEAP APPKAEAKAK ALKAKKAVLK GVHSHKKKKI RTSPTFRRPK TLRLRRQPKY 70 80 90 100 110 120 PRKSAPRRNK LDHYAIIKFP LTTESAMKKI EDNNTLVFIV DVKANKHQIK QAVKKLYDID 130 140 150 VAKVNTLIRP DGEKKAYVRL APDYDALDVA NKIGII

References

[1]	NIH - Mammalian Gene Collection (MGC) project Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: Hereford. Tissue: Thymus.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BC114200 mRNA. Translation: AAI14201.1.
IPI	IPI00706607.
RefSeq	NP_001039423.1. NM_001045958.1.
UniGene	Bt.5507.
3D structure databases
ProteinModelPortal	Q24JY1.
SMR	Q24JY1. Positions 36-156.
ModBase	Search...
Protein-protein interaction databases
STRING	Q24JY1.
Proteomic databases
PRIDE	Q24JY1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSBTAT00000030106; ENSBTAP00000030092; ENSBTAG00000022278. ENSBTAT00000045417; ENSBTAP00000042806; ENSBTAG00000032022. ENSBTAT00000053294; ENSBTAP00000050293; ENSBTAG00000039414. ENSBTAT00000065532; ENSBTAP00000056204; ENSBTAG00000046394.
GeneID	507168.
KEGG	bta:507168.
Organism-specific databases
CTD	6147.
Phylogenomic databases
eggNOG	maNOG19444.
GeneTree	ENSGT00390000003263.
HOVERGEN	HBG056619.
InParanoid	Q24JY1.
OMA	HTTESSM.
OrthoDB	EOG43JC62.
PhylomeDB	Q24JY1.
Family and domain databases
InterPro	IPR012677. Nucleotide-bd_a/b_plait. IPR019985. Ribosomal_L23. IPR012678. Ribosomal_L23/L15e_core_dom. IPR001014. Ribosomal_L23/L25_CS. IPR005633. Ribosomal_L23/L25_N. IPR013025. Ribosomal_L25/23. [Graphical view]
Gene3D	G3DSA:3.30.70.330. a_b_plait_nuc_bd. 1 hit.
KO	K02893.
Pfam	PF00276. Ribosomal_L23. 1 hit. PF03939. Ribosomal_L23eN. 1 hit. [Graphical view]
SUPFAM	SSF54189. L23_L15e_core. 1 hit.
TIGRFAMs	TIGR03636. L23_arch. 1 hit.
PROSITE	PS00050. RIBOSOMAL_L23. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL23A_BOVIN

Accession

Primary (citable) accession number: Q24JY1

Entry history

Integrated into UniProtKB/Swiss-Prot:	June 13, 2006
Last sequence update:	April 18, 2006
Last modified:	December 14, 2011
This is version 48 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Chordata Protein Annotation Program