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Protein
Submitted name:

GH26440p

Gene

Rbp9

Organism
Drosophila melanogaster (Fruit fly)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  • mRNA binding Source: FlyBase

GO - Biological processi

  • establishment of blood-brain barrier Source: FlyBase
  • germarium-derived egg chamber formation Source: FlyBase
  • germ cell proliferation Source: FlyBase
  • oogenesis Source: FlyBase

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotationSAAS annotation

Enzyme and pathway databases

ReactomeiR-DME-450520 HuR (ELAVL1) binds and stabilizes mRNA
R-DME-72163 mRNA Splicing - Major Pathway

Names & Taxonomyi

Protein namesi
Submitted name:
GH26440pImported
Submitted name:
RNA-binding proteinImported
Submitted name:
RNA-binding protein 9, isoform EImported
Submitted name:
RNA-binding protein 9, isoform FImported
Submitted name:
RNA-binding protein 9, isoform GImported
Submitted name:
RNA-binding protein 9, isoform HImported
Gene namesi
Name:Rbp9Imported
Synonyms:CG15402Imported, Dmel\CG3151Imported, fesImported, fs(2)BImported, rbpImported, Rbp10Imported, RBP9Imported, rbp9Imported, RBP9-2Imported, rbp9aImported, Rpb9Imported, RRM10Imported, rrm10Imported, RRM9Imported, rrm9Imported
ORF Names:CG3151Imported, Dmel_CG3151Imported
OrganismiDrosophila melanogaster (Fruit fly)Imported
Taxonomic identifieri7227 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraHolometabolaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora
Proteomesi
  • UP000000803 Componenti: Chromosome 2L

Organism-specific databases

FlyBaseiFBgn0010263 Rbp9

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PRIDEiQ24474

Expressioni

Gene expression databases

BgeeiFBgn0010263
ExpressionAtlasiQ24474 baseline and differential

Interactioni

Protein-protein interaction databases

IntActiQ24474, 2 interactors

Structurei

3D structure databases

SMRiQ24474
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini110 – 188RRMInterPro annotationAdd BLAST79
Domaini196 – 276RRMInterPro annotationAdd BLAST81
Domaini356 – 434RRMInterPro annotationAdd BLAST79

Keywords - Domaini

RepeatSAAS annotation

Phylogenomic databases

eggNOGiKOG0145 Eukaryota
ENOG410XP7S LUCA
GeneTreeiENSGT00760000118913
HOGENOMiHOG000114767
KOiK13208
OrthoDBiEOG091G0G9L

Family and domain databases

CDDicd12650 RRM1_Hu, 1 hit
Gene3Di3.30.70.330, 3 hits
InterProiView protein in InterPro
IPR006548 ELAD_HU_SF
IPR034775 ELAV/Hu_RRM1
IPR002343 Hud_Sxl_RNA
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
PfamiView protein in Pfam
PF00076 RRM_1, 3 hits
PRINTSiPR00961 HUDSXLRNA
SMARTiView protein in SMART
SM00360 RRM, 3 hits
SUPFAMiSSF54928 SSF54928, 2 hits
TIGRFAMsiTIGR01661 ELAV_HUD_SF, 1 hit
PROSITEiView protein in PROSITE
PS50102 RRM, 3 hits

Sequencei

Sequence statusi: Complete.

Q24474-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVEGQTAVQQ QQQQPSGAGG ASGVGSTTGS AGGPATANNV TNSQAQTNGG
60 70 80 90 100
TTATTTAAAG AGSTTNAAVG QATANNAASN NNNNNNNTNN NNNNNATANN
110 120 130 140 150
NNNNEPDPKT NLIVNYLPQT MSQDEIRSLF VSFGEVESCK LIRDKVTGQS
160 170 180 190 200
LGYGFVNYVK QEDAEKAINA LNGLRLQNKT IKVSIARPSS ESIKGANLYV
210 220 230 240 250
SGLPKNMTQS DLESLFSPYG KIITSRILCD NITGLSKGVG FIRFDQRFEA
260 270 280 290 300
DRAIKELNGT TPKNSTEPIT VKFANNPSSN KNSMQPLAAY IAPQNTRGGR
310 320 330 340 350
AFPANAAAGA AAAAAAAAIH PNAGRYSSVI SRYSPLTSDL ITNGMIQGNT
360 370 380 390 400
IASSGWCIFV YNLAPDTEEN VLWQLFGPFG AVQSVKVIRD LQSNKCKGFG
410 420 430
FVTMTNYEEA VLAIQSLNGY TLGNRVLQVS FKTNKNKQT
Length:439
Mass (Da):46,245
Last modified:November 1, 1996 - v1
Checksum:i47FF65ACFFD950D1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L04930 Genomic DNA Translation: AAC13646.1
AE014134 Genomic DNA Translation: AAN10401.3
AE014134 Genomic DNA Translation: AAN10402.1
AE014134 Genomic DNA Translation: AAN10403.1
BT011197 mRNA Translation: AAR88559.1
AE014134 Genomic DNA Translation: AAX52651.1
RefSeqiNP_001014462.1, NM_001014462.3
NP_476936.3, NM_057588.3
NP_599125.1, NM_134298.5
NP_599126.1, NM_134299.5
UniGeneiDm.4071

Genome annotation databases

EnsemblMetazoaiFBtr0077638; FBpp0077323; FBgn0010263
FBtr0077640; FBpp0077325; FBgn0010263
FBtr0100468; FBpp0099898; FBgn0010263
FBtr0290237; FBpp0288676; FBgn0010263
FBtr0330213; FBpp0303246; FBgn0010263
GeneIDi33498
KEGGidme:Dmel_CG3151
UCSCiCG3151-RE d. melanogaster

Similar proteinsi

Entry informationi

Entry nameiQ24474_DROME
AccessioniPrimary (citable) accession number: Q24474
Secondary accession number(s): Q7KU26
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: May 23, 2018
This is version 158 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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