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Protein
Submitted name:

Polyprotein

Gene

polyprotein

Organism
Drosophila melanogaster (Fruit fly)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase, Nucleotidyltransferase, ProteaseImported, RNA-directed DNA polymeraseImported, Transferase

Keywords - Ligandi

Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
PolyproteinImported
Gene namesi
Name:polyproteinImported
OrganismiDrosophila melanogaster (Fruit fly)
Taxonomic identifieri7227 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora

Organism-specific databases

FlyBaseiFBgn0043876. micropia\polyprotein.

PTM / Processingi

Proteomic databases

PeptideAtlasiQ24310.
PRIDEiQ24310.

Structurei

3D structure databases

ProteinModelPortaliQ24310.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini245 – 26016CCHC-typeInterPro annotationAdd
BLAST
Domaini481 – 649169Reverse transcriptaseInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 1 reverse transcriptase domain.UniRule annotation

Keywords - Domaini

Zinc-fingerUniRule annotation

Family and domain databases

Gene3Di4.10.60.10. 1 hit.
InterProiIPR021109. Peptidase_aspartic_dom.
IPR000477. RT_dom.
IPR001878. Znf_CCHC.
[Graphical view]
PfamiPF00078. RVT_1. 1 hit.
PF00098. zf-CCHC. 1 hit.
[Graphical view]
SMARTiSM00343. ZnF_C2HC. 2 hits.
[Graphical view]
SUPFAMiSSF50630. SSF50630. 1 hit.
SSF57756. SSF57756. 1 hit.
PROSITEiPS50878. RT_POL. 1 hit.
PS50158. ZF_CCHC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q24310-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQNRNLAELV KIMQKTPARE QQPSYDVKLP KFNPDAACVE AAKWCSTTDI
60 70 80 90 100
ILTEHPLKGS KLITALSNCM EGTASQWLTQ ISYQGMTWQE FQELFLQRFE
110 120 130 140 150
TEETPAATFL NLLNSRPTAA ECYAVYASRL VTQLTTKWRN MEIEEIAVTT
160 170 180 190 200
VLAHMANIDS RLQRVLFTSN VRTRSKLQAE LKAFTFDKKR HARDDNLGPD
210 220 230 240 250
QKNRKASPVV CHFCSKPGRR IAECRSKMRQ DRRAKPQREK SNVTCYRCGQ
260 270 280 290 300
PGHFSNQCPK NGTAAKQDVT QQKTVNQCCV TEPKGSLHQR GEIYPICFDS
310 320 330 340 350
GAECSLIKDD ISSKLSGKRI NNTVMIKGIG GGSVCSTLQI LSEVTINENI
360 370 380 390 400
MEILFHVVPN EEMRNDILIG REILKQGFYV ILTSDNFKVV KSKTVNNCSV
410 420 430 440 450
TERSFTLSDI DTELVDNEKA QLIELLEKHS TSFTNGIPHT RVNTGEMKIR
460 470 480 490 500
LIDPTKTVQR RPYRLSPEER EVVRMQVSEL IRCNIVRPSC SPFASPMLLV
510 520 530 540 550
KKKNGTDRLC VDFRELNSNT ISDKYPLPLI SDQIARLRGA NYFTCLDMAS
560 570 580 590 600
GFHQIPIHPE SVEYTAFVPD GLKNAPSVFQ RTVINALGDL ANSFVIVYMD
610 620 630 640 650
DIMVVSPTKE LALERLKTVL NVLTKAGFTF NLAKCSFLKT TVQYLGYEVR
660 670 680 690 700
AGEIRPNVRK IASLSSLPPP QTVSGVRQFI GLASYFRKFV SGFSQLMKPL
710 720 730 740 750
YSLSSGSGKI TWSAELEEIR LKVVTILTNE PALVIFDPQY PIELHTDASA
760 770 780 790 800
CGYGAILLHR IESKPHVIEY FSKTTTSVES RYHSYELETL AVVKAVKHFR
810 820 830 840 850
HYLIGREFVV YTDCNSLKAS RTKIDLTPRV HRWWAYLQSF NFEIQYREGK
860 870 880 890 900
RMAHVDFLSR NPLSPEHILS INKIPEKRVN LSEISSTWLL AEQRLDLEII
910 920 930 940 950
EIVNKLESDE LAENLAKTYD LRKGVLYRKV QRRGRTSYLP VVPRAFKWSV
960 970 980 990 1000
INQVHESIMH LGWQKTLDKV YQYYWFAKMN KYVRKFVSNC ITCRSVKSSS
1010 1020 1030 1040 1050
GKVQAELHSI PKTSIPWHTI HIDITGKLSG KSDLKEYVIV QIDAYTKFVY

LLP
Length:1,053
Mass (Da):119,981
Last modified:November 1, 1996 - v1
Checksum:iBAC3FC2FF954A0C2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X14037 Genomic DNA. Translation: CAA32198.1.
PIRiS02021.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X14037 Genomic DNA. Translation: CAA32198.1.
PIRiS02021.

3D structure databases

ProteinModelPortaliQ24310.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PeptideAtlasiQ24310.
PRIDEiQ24310.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

FlyBaseiFBgn0043876. micropia\polyprotein.

Family and domain databases

Gene3Di4.10.60.10. 1 hit.
InterProiIPR021109. Peptidase_aspartic_dom.
IPR000477. RT_dom.
IPR001878. Znf_CCHC.
[Graphical view]
PfamiPF00078. RVT_1. 1 hit.
PF00098. zf-CCHC. 1 hit.
[Graphical view]
SMARTiSM00343. ZnF_C2HC. 2 hits.
[Graphical view]
SUPFAMiSSF50630. SSF50630. 1 hit.
SSF57756. SSF57756. 1 hit.
PROSITEiPS50878. RT_POL. 1 hit.
PS50158. ZF_CCHC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Micropia: a retrotransposon of Drosophila combining structural features of DNA viruses, retroviruses and non-viral transposable elements."
    Lankenau D.H., Huijser P., Jansen E., Miedema K., Hennig W.
    J. Mol. Biol. 204:233-246(1988) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: CantonSImported.
  2. Lankenau D.H.
    Submitted (OCT-1995) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: CantonSImported.

Entry informationi

Entry nameiQ24310_DROME
AccessioniPrimary (citable) accession number: Q24310
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: July 6, 2016
This is version 82 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.