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Q24090 (Q24090_DROME) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 93. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

SNR1 EMBL AAC77830.1

Snf5-related 1 EMBL AAF52024.1
Gene names
Name:Snr1 FlyBase FBgn0011715 EMBL AAF52024.1
ORF Names:CG1064 FlyBase FBgn0011715, Dmel_CG1064 EMBL AAF52024.1
OrganismDrosophila melanogaster (Fruit fly)
Taxonomic identifier7227 [NCBI]
Taxonomic lineageEukaryotaMetazoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora

Protein attributes

Sequence length370 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
Q24090 [UniParc].

Last modified January 1, 1999. Version 2.
Checksum: C6154768FCEA997D

FASTA37041,911
        10         20         30         40         50         60 
MALQTYGDKP VAFQLEEGGE YYYVGSEVGN YMRHFRGILY KKYPGMTRIV LSNEERKRLA 

        70         80         90        100        110        120 
ESGLSSHILA SSVSLLRAVE VDDIMAGNDE KYRAVSVNTS DTPVPRESKS KKQPQYVPTM 

       130        140        150        160        170        180 
PNSSHLDAVP QATPINRNRV HTKKVRTFPM CFDDTDPTAS LENAAQKECL VPIRLDMELE 

       190        200        210        220        230        240 
GQKLRDTFTW NKNESMITPE QFAEVLCDDL DLNPLPFVPA IAQAIRQQIE AFPNDPPILE 

       250        260        270        280        290        300 
ETCDQRVIVK LNIHVGNTSL VDQVEWDMSE KNNNPEEFAI KLCAELGLGG EFVTAIAYSI 

       310        320        330        340        350        360 
RGQLSWHCRT YAFSEAPLST IDVPFRNPSD ADAWAPFLET LTDAEMEKKI RDQDRNTRRM 

       370 
RRLANTTTGW 

« Hide

References

« Hide 'large scale' references
[1]"The Drosophila snr1 and brm proteins are related to yeast SWI/SNF proteins and are components of a large protein complex."
Dingwall A.K., Beek S.J., McCallum C.M., Tamkun J.W., Kalpana G.V., Goff S.P., Scott M.P.
Mol. Biol. Cell 6:777-791(1995) [PubMed: 7579694] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[2]"The genome sequence of Drosophila melanogaster."
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. expand/collapse author list , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L., Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[3]"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review."
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. expand/collapse author list , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley.
[4]Stapleton M., Brokstein P., Hong L., Agbayani A., Carlson J., Champe M., Chavez C., Dorsett V., Dresnek D., Farfan D., Frise E., George R., Gonzalez M., Guarin H., Kronmiller B., Li P., Liao G., Miranda A. expand/collapse author list , Mungall C.J., Nunoo J., Pacleb J., Paragas V., Park S., Patel S., Phouanenavong S., Wan K., Yu C., Lewis S.E., Rubin G.M., Celniker S.
Submitted (DEC-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley EMBL AAL47972.1.
[5]Dingwall A.K.
Submitted (NOV-1998) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U28485 mRNA. Translation: AAC77830.1.
AE014297 Genomic DNA. Translation: AAF52024.1.
AY070501 mRNA. Translation: AAL47972.1.
RefSeqNP_730935.1. NM_169055.2.
UniGeneDm.4358.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

DIPDIP-17554N.
IntActQ24090. 4 interactions.
MINTMINT-332338.
STRINGQ24090.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaFBtr0078682; FBpp0078331; FBgn0011715.
GeneID40657.
KEGGdme:Dmel_CG1064.
NMPDRfig|7227.3.peg.11198.
UCSCCG1064-RA. d. melanogaster.

Organism-specific databases

CTD40657.
FlyBaseFBgn0011715. Snr1.

Phylogenomic databases

eggNOGinNOG05860.
GeneTreeEMGT00050000007746.
InParanoidQ24090.
OMAVKLNIHV.
OrthoDBEOG4CRJFN.
PhylomeDBQ24090.

Gene expression databases

ArrayExpressQ24090.
BgeeQ24090.

Family and domain databases

InterProIPR006939. SNF5.
IPR017393. SWI_SNF_chromatin_remodel_cplx.
[Graphical view]
KOK11648.
PANTHERPTHR10019. SNF5. 1 hit.
PfamPF04855. SNF5. 1 hit.
[Graphical view]
PIRSFPIRSF038126. SWI_SNF. 1 hit.
ProtoNetSearch...

Other

NextBio819884.

Entry information

Entry nameQ24090_DROME
AccessionPrimary (citable) accession number: Q24090
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: January 1, 1999
Last modified: January 25, 2012
This is version 93 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)