Unreviewed, UniProtKB/TrEMBL Q24090 (Q24090_DROME)

Names and origin

Protein names

Submitted name:
    Snf5-related 1 EMBL AAF52024.1
Submitted name:
    GH08712p EMBL AAL47972.1
    SNR1 EMBL AAC77830.1

Gene names

Name:	Snr1 EMBL AAF52024.1 FlyBase FBgn0011715
ORF Names:	CG1064 FlyBase FBgn0011715, Dmel_CG1064 EMBL AAF52024.1

Organism

Drosophila melanogaster (Fruit fly) [Complete proteome]

Taxonomic identifier

7227 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length	370 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	chromatin remodeling Inferred from electronic annotation. Source: InterPro dendrite morphogenesis Inferred from mutant phenotype. Source: FlyBase epidermis development Inferred from mutant phenotype. Source: FlyBase imaginal disc-derived wing vein specification Inferred from mutant phenotype. Source: FlyBase muscle organ development Inferred from mutant phenotype. Source: FlyBase positive regulation of transcription, DNA-dependent Inferred from direct assay. Source: FlyBase
Cellular component	brahma complex Inferred from direct assay. Source: FlyBase nuclear chromosome Inferred from electronic annotation. Source: InterPro
Molecular function	protein binding Inferred from physical interaction. Source: IntAct
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q24090-1 [UniParc]. Last modified January 1, 1999. Version 2. Checksum: C6154768FCEA997D	FASTA	370	41,911
	10 20 30 40 50 60 MALQTYGDKP VAFQLEEGGE YYYVGSEVGN YMRHFRGILY KKYPGMTRIV LSNEERKRLA 70 80 90 100 110 120 ESGLSSHILA SSVSLLRAVE VDDIMAGNDE KYRAVSVNTS DTPVPRESKS KKQPQYVPTM 130 140 150 160 170 180 PNSSHLDAVP QATPINRNRV HTKKVRTFPM CFDDTDPTAS LENAAQKECL VPIRLDMELE 190 200 210 220 230 240 GQKLRDTFTW NKNESMITPE QFAEVLCDDL DLNPLPFVPA IAQAIRQQIE AFPNDPPILE 250 260 270 280 290 300 ETCDQRVIVK LNIHVGNTSL VDQVEWDMSE KNNNPEEFAI KLCAELGLGG EFVTAIAYSI 310 320 330 340 350 360 RGQLSWHCRT YAFSEAPLST IDVPFRNPSD ADAWAPFLET LTDAEMEKKI RDQDRNTRRM 370 RRLANTTTGW

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review." Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E. Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Berkeley.
[2]	"The genome sequence of Drosophila melanogaster." Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G., Abril J.F., Agbayani A., An H.-J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.-H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C.L., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J.H., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D.C., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.-Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., Woodage T., Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.-F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S.C., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C. Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Berkeley.
[3]	"The Drosophila snr1 and brm proteins are related to yeast SWI/SNF proteins and are components of a large protein complex." Dingwall A.K., Beek S.J., McCallum C.M., Tamkun J.W., Kalpana G.V., Goff S.P., Scott M.P. Mol. Biol. Cell 6:777-791(1995) [PubMed: 7579694] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[4]	Dingwall A.K. Submitted (NOV-1998) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[5]	Stapleton M., Brokstein P., Hong L., Agbayani A., Carlson J., Champe M., Chavez C., Dorsett V., Dresnek D., Farfan D., Frise E., George R., Gonzalez M., Guarin H., Kronmiller B., Li P., Liao G., Miranda A. , Mungall C.J., Nunoo J., Pacleb J., Paragas V., Park S., Patel S., Phouanenavong S., Wan K., Yu C., Lewis S.E., Rubin G.M., Celniker S. Submitted (DEC-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: Berkeley EMBL AAL47972.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBLGenBankDDBJ	U28485 mRNA. Translation: AAC77830.1. AE014297 Genomic DNA. Translation: AAF52024.1. AY070501 mRNA. Translation: AAL47972.1.
RefSeq	NP_730935.1.
UniGene	Dm.4358
3D structure databases
ModBase	Search...
Protein-protein interaction databases
IntAct	Q24090. 70 interactions.
Genome annotation databases
Ensembl	FBgn0011715. Drosophila melanogaster. [Contig view]
GeneID	40657.
KEGG	dme:Dmel_CG1064.
NMPDR	fig|7227.3.peg.11198.
Organism-specific databases
FlyBase	FBgn0011715. Snr1.
Phylogenomic databases
HOGENOM	Q24090.
OMA	Q24090. RTFPLWC.
Gene expression databases
ArrayExpress	Q24090.
Family and domain databases
InterPro	IPR006939. SNF5. IPR017393. SWI_SNF_chromatin_remodel_cplx. [Graphical view]
PANTHER	PTHR10019. SNF5. 1 hit.
Pfam	PF04855. SNF5. 1 hit. [Graphical view]
PIRSF	PIRSF038126. SWI_SNF. 1 hit.
ProtoNet	Search...
Other Resources
NextBio	819884.

Entry information

Entry name

Q24090_DROME

Accession

Primary (citable) accession number: Q24090

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1996
Last sequence update:	January 1, 1999
Last modified:	June 16, 2009
This is version 66 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)