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Protein
Submitted name:

Elongation factor Tu protein

Gene

TTHERM_00666610

Organism
Tetrahymena thermophila (strain SB210)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. GTPase activity Source: InterPro
  2. GTP binding Source: UniProtKB-KW
  3. translation elongation factor activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Elongation factorImported

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

GTP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
Elongation factor Tu proteinImported
Gene namesi
ORF Names:TTHERM_00666610Imported
OrganismiTetrahymena thermophila (strain SB210)Imported
Taxonomic identifieri312017 [NCBI]
Taxonomic lineageiEukaryotaAlveolataCiliophoraIntramacronucleataOligohymenophoreaHymenostomatidaTetrahymeninaTetrahymenidaeTetrahymena
ProteomesiUP000009168: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi5911.XP_001020030.

Family & Domainsi

Phylogenomic databases

InParanoidiQ23TC1.
KOiK14416.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamiPF00009. GTP_EFTU. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSiPR00315. ELONGATNFCT.
SUPFAMiSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.

Sequencei

Sequence statusi: Complete.

Q23TC1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSRNTKMKQI AAEGIDDHYH SEDDEQFNSE DEEIIEDIIF HYKNQFTKKE
60 70 80 90 100
VVRILDKHNW VEDDVYDALD DLKKKREQKQ NKVTEEKKQP TGGNVLVKKQ
110 120 130 140 150
QNQNQQGKSN NDQAAQLTKQ ASSSVTAAST SGATTAPSDK SKAGEYIKIE
160 170 180 190 200
RDVVKFNQAY PSVEYDIEAD KKEENVKNMN LVIVGHVDSG KSTLVGHLCH
210 220 230 240 250
LKKVIDQKLA HKNEKESKNI GKESFKFAWV NDEFEAERQR GITIDIGYKV
260 270 280 290 300
IQTKNKNITF LDAPGHKDFV PNMIQGVTQA DYALLVIEGS LQAFERGFEF
310 320 330 340 350
GGQTKEHAFL VKQLGVQRLI VLINKMDTVN WDRNRFEYIK LELTRFLTSI
360 370 380 390 400
GYSEDNLIFV PISAFYAENI VEKSKLPEAG WYEGKCLMEL LDTLPVPTRP
410 420 430 440 450
VNTPLRLNIY NSFYQKNKGL IIQGKVEGGV IFEKSKALIM PQGLVVTVKE
460 470 480 490 500
INRENVKVKY AKVGENIDVH IVHKEDCEIR SGDVLCSIEH PIPISRIFEV
510 520 530 540 550
ELSAFELSYP ILKGAQIVMY INTAKCPGYI KKITAILDKA NGQITKKNPK
560 570 580 590 600
CIRNNECAIV EVCIEKENCM ELFSNFKSFG RVVLREKMNT IGVGSITKIL
Length:600
Mass (Da):68,122
Last modified:April 18, 2006 - v1
Checksum:iD0840B69E3378D9E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GG662636 Genomic DNA. Translation: EAR99785.1.
RefSeqiXP_001020030.1. XM_001020030.1.

Genome annotation databases

EnsemblProtistsiEAR99785; EAR99785; TTHERM_00666610.
GeneIDi7842500.
KEGGitet:TTHERM_00666610.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GG662636 Genomic DNA. Translation: EAR99785.1.
RefSeqiXP_001020030.1. XM_001020030.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi5911.XP_001020030.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblProtistsiEAR99785; EAR99785; TTHERM_00666610.
GeneIDi7842500.
KEGGitet:TTHERM_00666610.

Phylogenomic databases

InParanoidiQ23TC1.
KOiK14416.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamiPF00009. GTP_EFTU. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSiPR00315. ELONGATNFCT.
SUPFAMiSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Macronuclear genome sequence of the ciliate Tetrahymena thermophila, a model eukaryote."
    Eisen J.A., Coyne R.S., Wu M., Wu D., Thiagarajan M., Wortman J.R., Badger J.H., Ren Q., Amedeo P., Jones K.M., Tallon L.J., Delcher A.L., Salzberg S.L., Silva J.C., Haas B.J., Majoros W.H., Farzad M., Carlton J.M.
    , Smith R.K. Jr., Garg J., Pearlman R.E., Karrer K.M., Sun L., Manning G., Elde N.C., Turkewitz A.P., Asai D.J., Wilkes D.E., Wang Y., Cai H., Collins K., Stewart B.A., Lee S.R., Wilamowska K., Weinberg Z., Ruzzo W.L., Wloga D., Gaertig J., Frankel J., Tsao C.-C., Gorovsky M.A., Keeling P.J., Waller R.F., Patron N.J., Cherry J.M., Stover N.A., Krieger C.J., del Toro C., Ryder H.F., Williamson S.C., Barbeau R.A., Hamilton E.P., Orias E.
    PLoS Biol. 4:1620-1642(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SB210Imported.

Entry informationi

Entry nameiQ23TC1_TETTS
AccessioniPrimary (citable) accession number: Q23TC1
Entry historyi
Integrated into UniProtKB/TrEMBL: April 18, 2006
Last sequence update: April 18, 2006
Last modified: March 4, 2015
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.