Q23DI3 (Q23DI3_TETTS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Succinate dehydrogenase, flavoprotein subunit containing protein EMBL EAR94519.2
EC=1.3.5.1 EMBL EAR94519.2

Gene names

ORF Names:

TTHERM_00047080 EMBL EAR94519.2

Organism

Tetrahymena thermophila (strain SB210) [Reference proteome]

Taxonomic identifier

312017 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Alveolata › Ciliophora › Intramacronucleata › Oligohymenophorea › Hymenostomatida › Tetrahymenina › Tetrahymenidae › Tetrahymena › Tetrahymena thermophila

Protein attributes

Sequence length	636 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Oxidoreductase EMBL EAR94519.2
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	electron transport chain Inferred from electronic annotation. Source: InterPro tricarboxylic acid cycle Inferred from electronic annotation. Source: InterPro
Molecular_function	flavin adenine dinucleotide binding Inferred from electronic annotation. Source: InterPro succinate dehydrogenase (ubiquinone) activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q23DI3 [UniParc]. Last modified May 29, 2007. Version 2. Checksum: 6FAA059568A0A8D6	FASTA	636	69,980
	10 20 30 40 50 60 MFKYLSKIQR VTLHSKVSKN FAVLSKDHPE KGPSQGHLTD KYTVIDHTYD AIVVGAGGAG 70 80 90 100 110 120 LRAAFGLVEE GFKTACITKL FPTRSHTVAA QGGINAALGN MTEDDWKWHF YDTVKGSDWL 130 140 150 160 170 180 GDQDAIQYMT REAPAAVLEL ESYGLPFSRT PEGKIYQRAF GGQSLKFGKG GQARRTACAA 190 200 210 220 230 240 DRTGHAMLHT LFGRSLAYNC NFFIEYFVID LIMDEEGACR GVICMSMADG SIHRIRAHYT 250 260 270 280 290 300 VLAAGGYGRS YLSCTAAHTC TGDGMALATR AGLPLEDPEF VQFHPTGIYG SGCLMTEGCR 310 320 330 340 350 360 GEGGILVNSN GEAFMEKYAP TAKDLASRDV VSRAMTIEIL EGRGVGPKKD HIFLQLHHLS 370 380 390 400 410 420 PETLHQRLPG ISETARIFAG VDVTKEPAPV VPTVHYNMGG VPTNWKTEVI TQDKNGKDKI 430 440 450 460 470 480 VPGLLAAGEN ACASVHGANR LGANSLLDIV VFGRAAAKLV KEKLKPGTPH KDLPKNAGEQ 490 500 510 520 530 540 ALARLDKYRF ANGEYTTHHV RTAMQETMQR HAAVFRIEKL MAEGVQKLDH IYEQSKSLKT 550 560 570 580 590 600 FDRGLVWNTD LIETLELENL LLCSKQTLLA GLLRKESRGA HARDDFKERD DKNWMKHSLT 610 620 630 WIKDVNTGKT EVTYRDVINH TLDSEVTPVP PAKRSY

References

[1]

"Macronuclear genome sequence of the ciliate Tetrahymena thermophila, a model eukaryote." Eisen J.A., Coyne R.S., Wu M., Wu D., Thiagarajan M., Wortman J.R., Badger J.H., Ren Q., Amedeo P., Jones K.M., Tallon L.J., Delcher A.L., Salzberg S.L., Silva J.C., Haas B.J., Majoros W.H., Farzad M., Carlton J.M. , Smith R.K. Jr., Garg J., Pearlman R.E., Karrer K.M., Sun L., Manning G., Elde N.C., Turkewitz A.P., Asai D.J., Wilkes D.E., Wang Y., Cai H., Collins K., Stewart B.A., Lee S.R., Wilamowska K., Weinberg Z., Ruzzo W.L., Wloga D., Gaertig J., Frankel J., Tsao C.-C., Gorovsky M.A., Keeling P.J., Waller R.F., Patron N.J., Cherry J.M., Stover N.A., Krieger C.J., del Toro C., Ryder H.F., Williamson S.C., Barbeau R.A., Hamilton E.P., Orias E. PLoS Biol. 4:1620-1642(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: SB210.

Cross-references

Sequence databases
EMBL GenBank DDBJ	GG662712 Genomic DNA. Translation: EAR94519.2.
RefSeq	XP_001014703.2. XM_001014703.2.
UniGene	Tth.2689.
3D structure databases
ProteinModelPortal	Q23DI3.
SMR	Q23DI3. Positions 41-636.
ModBase	Search...
Protein-protein interaction databases
STRING	5911.XP_001014703.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblProtists	EAR94519; EAR94519; TTHERM_00047080.
GeneID	7844993.
KEGG	tet:TTHERM_00047080.
Phylogenomic databases
KO	K00234.
ProtClustDB	PTZ00139.
Family and domain databases
Gene3D	1.20.58.100. 1 hit. 3.90.700.10. 1 hit.
InterPro	IPR003953. FAD_bind_dom. IPR003952. FRD_SDH_FAD_BS. IPR015939. Fum_Rdtase/Succ_DH_flav-like_C. IPR027477. Succ_DH/fumarate_Rdtase_cat. IPR011281. Succ_DH_flav_su_fwd. IPR014006. Succ_Dhase_FrdA_Gneg. [Graphical view]
PANTHER	PTHR11632:SF5. PTHR11632:SF5. 1 hit.
Pfam	PF00890. FAD_binding_2. 1 hit. PF02910. Succ_DH_flav_C. 1 hit. [Graphical view]
SUPFAM	SSF56425. SSF56425. 1 hit. SSF46977. Succ_DH_flav_C. 1 hit.
TIGRFAMs	TIGR01816. sdhA_forward. 1 hit. TIGR01812. sdhA_frdA_Gneg. 1 hit.
PROSITE	PS00504. FRD_SDH_FAD_BINDING. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q23DI3_TETTS

Accession

Primary (citable) accession number: Q23DI3

Entry history

Integrated into UniProtKB/TrEMBL:	April 18, 2006
Last sequence update:	May 29, 2007
Last modified:	May 29, 2013
This is version 48 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)