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Protein
Submitted name:

Y-box protein

Gene
N/A
Organism
Dugesia japonica (Planarian)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Y-box proteinImported
OrganismiDugesia japonica (Planarian)Imported
Taxonomic identifieri6161 [NCBI]
Taxonomic lineageiEukaryotaMetazoaPlatyhelminthesRhabditophoraSeriataTricladidaContinenticolaGeoplanoideaDugesiidaeDugesia

Structurei

3D structure databases

ProteinModelPortaliQ23960.
SMRiQ23960. Positions 22-98.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini30 – 9869CSPInterPro annotationAdd
BLAST

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR011129. Cold_shock_prot.
IPR002059. CSP_DNA-bd.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF00313. CSD. 1 hit.
[Graphical view]
PRINTSiPR00050. COLDSHOCK.
SMARTiSM00357. CSP. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.

Sequencei

Sequence statusi: Complete.

Q23960-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MANNQEKTDE YEGNAADSSK QKQLLHTGIT GKVKWFNVKR GYGFVCRNDN
60 70 80 90 100
QEDIFIHQSA IVKSNPDHPR KSVGEGEEIL FDIVKGAKGN EAANVSAIDG
110 120 130 140 150
KCVKGSEYAL RYPRGRGRGR GVFRGRGRSR VVSEEGDMHT QEFARGRGRP
160 170 180 190 200
FRGGRPYVVQ YRKPNYNYDM PQQYFYEFDY YRGPPRGQGE DFVDEVLGGV
210 220 230 240 250
SPREVPMKYE QFDNEMFDRR PFGRGRPRGR GRGRSRGRGR GRGSPRDNPK
260
ANENEEQHQS DQPLQD
Length:266
Mass (Da):30,404
Last modified:November 1, 1996 - v1
Checksum:i79E639CC89D5761F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X99748 mRNA. Translation: CAA68079.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X99748 mRNA. Translation: CAA68079.1.

3D structure databases

ProteinModelPortaliQ23960.
SMRiQ23960. Positions 22-98.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR011129. Cold_shock_prot.
IPR002059. CSP_DNA-bd.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF00313. CSD. 1 hit.
[Graphical view]
PRINTSiPR00050. COLDSHOCK.
SMARTiSM00357. CSP. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ23960_DUGJA
AccessioniPrimary (citable) accession number: Q23960
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: September 7, 2016
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.