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Reviewed, UniProtKB/Swiss-Prot Q23911 (29C_DICDI)

Last modified September 22, 2009. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Protein 29C
Gene names
Name: 29C
ORF Names: DDB_G0291255
OrganismDictyostelium discoideum (Slime mold) [Complete proteome]
Taxonomic identifier44689 [NCBI]
Taxonomic lineageEukaryotaAmoebozoaMycetozoaDictyosteliidaDictyostelium

Protein attributes

Sequence length184 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology.

General annotation (Comments)

Subcellular location

Secreted Potential.

Sequence similarities

Belongs to the gp17/29C family.

Sequence caution

The sequence AAA33217.1 differs from that shown. Reason: Erroneous gene model prediction.

Ontologies

Keywords
   Cellular componentSecreted
   DomainSignal
   PTMGlycoprotein
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular componentextracellular region

Inferred from electronic annotation. Source: UniProtKB-SubCell

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 1919 Potential
Chain20 – 184165Protein 29C
PRO_0000361525

Regions

Motif164 – 1663Cell attachment site Potential

Amino acid modifications

Glycosylation1291N-linked (GlcNAc...) Potential

Sequences

Sequence LengthMass (Da)Tools
Q23911-1 [UniParc].

Last modified January 20, 2009. Version 2.
Checksum: 6FF92B47B4033ED5

FASTA18419,750
        10         20         30         40         50         60 
MRFILVLVLI LGLVSSSFGI NVDKNEVSQT ELQSARDFSS FAIGFAEGIE ISLTGNLHKC 

        70         80         90        100        110        120 
VAAAESSFSE FSNSFHLIDS GLKHKSLGDA KSGLRDFGIG LVDLVKTYQR CGVGKFISEI 

       130        140        150        160        170        180 
SAISKEVTNE TGIIKLIIHE VIDIFHNSHS LTSDFKSAIS DCGRGDYTGC GVASGKIVGI 


LMRQ 

« Hide

References

« Hide 'large scale' references
[1]"The genome of the social amoeba Dictyostelium discoideum."
Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R., Berriman M., Song J., Olsen R., Szafranski K., Xu Q., Tunggal B., Kummerfeld S., Madera M., Konfortov B.A., Rivero F., Bankier A.T., Lehmann R., Hamlin N. expand/collapse author list , Davies R., Gaudet P., Fey P., Pilcher K., Chen G., Saunders D., Sodergren E.J., Davis P., Kerhornou A., Nie X., Hall N., Anjard C., Hemphill L., Bason N., Farbrother P., Desany B., Just E., Morio T., Rost R., Churcher C.M., Cooper J., Haydock S., van Driessche N., Cronin A., Goodhead I., Muzny D.M., Mourier T., Pain A., Lu M., Harper D., Lindsay R., Hauser H., James K.D., Quiles M., Madan Babu M., Saito T., Buchrieser C., Wardroper A., Felder M., Thangavelu M., Johnson D., Knights A., Loulseged H., Mungall K.L., Oliver K., Price C., Quail M.A., Urushihara H., Hernandez J., Rabbinowitsch E., Steffen D., Sanders M., Ma J., Kohara Y., Sharp S., Simmonds M.N., Spiegler S., Tivey A., Sugano S., White B., Walker D., Woodward J.R., Winckler T., Tanaka Y., Shaulsky G., Schleicher M., Weinstock G.M., Rosenthal A., Cox E.C., Chisholm R.L., Gibbs R.A., Loomis W.F., Platzer M., Kay R.R., Williams J.G., Dear P.H., Noegel A.A., Barrell B.G., Kuspa A.
Nature 435:43-57(2005) [PubMed: 15875012] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: AX4.
[2]"Developmental regulation of DNase I-hypersensitive sites in Dictyostelium discoideum."
Ayres K., Neuman W., Rowekamp W.G., Chung S.
Mol. Cell. Biol. 7:1823-1829(1987) [PubMed: 3600646] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-61.
Strain: AX3.
+Additional computationally mapped references.

Cross-references

Sequence databases

AAFI02000177 Genomic DNA. Translation: EAL61611.1.
M16346 Genomic DNA. Translation: AAA33217.1. Sequence problems.
RefSeqXP_635104.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID3386899.
GenomeReviewsGene locus 29C in contig CM000155_GR.
KEGGddi:DDB_0215394.

Organism-specific databases

dictyBaseDDB_G0291255. 29C.

Family and domain databases

ProtoNetSearch...

Entry information

Entry name29C_DICDI
AccessionPrimary (citable) accession number: Q23911
Secondary accession number(s): Q54EY6
Entry history
Integrated into UniProtKB/Swiss-Prot: January 20, 2009
Last sequence update: January 20, 2009
Last modified: September 22, 2009
This is version 28 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)

Relevant documents

Dictyostelium discoideum

Dictyostelium discoideum: entries, gene names and cross-references to dictyBase

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents