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Protein

Ribosomal protein S12, mitochondrial

Gene

mrps12

Organism
Dictyostelium discoideum (Slime mold)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosomal protein S12, mitochondrial
Short name:
MRP-S12
Short name:
S12mt
Gene namesi
Name:mrps12
Synonyms:rps12
ORF Names:DDB_G0294074
Encoded oniMitochondrion
OrganismiDictyostelium discoideum (Slime mold)
Taxonomic identifieri44689 [NCBI]
Taxonomic lineageiEukaryotaAmoebozoaMycetozoaDictyosteliidaDictyostelium
Proteomesi
  • UP000002195 Componenti: Mitochondrion

Organism-specific databases

dictyBaseiDDB_G0294074. mrps12.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 140140Ribosomal protein S12, mitochondrialPRO_0000312374Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ23886.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S12P family.Curated

Phylogenomic databases

InParanoidiQ23886.
OMAiMITINQI.
PhylomeDBiQ23886.

Family and domain databases

CDDicd03368. Ribosomal_S12. 1 hit.
Gene3Di2.40.50.140. 1 hit.
InterProiIPR012340. NA-bd_OB-fold.
IPR006032. Ribosomal_S12/S23.
IPR005679. Ribosomal_S12_bac.
[Graphical view]
PANTHERiPTHR11652. PTHR11652. 1 hit.
PfamiPF00164. Ribosom_S12_S23. 1 hit.
[Graphical view]
PIRSFiPIRSF002133. Ribosomal_S12/S23. 1 hit.
PRINTSiPR01034. RIBOSOMALS12.
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00981. rpsL_bact. 1 hit.
PROSITEiPS00055. RIBOSOMAL_S12. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q23886-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MITINQITDR KARGPKKKRK TLLTGYPQKK GYCMRVYETK PKKPNSAIRK
60 70 80 90 100
VAKVTIKLKN KRKNLIAYIP GFGPHNLQPL STVLVKGGRC QDLPGVKYRL
110 120 130 140
VRKHYDFLAA ERFVRKNRRS KFSVKNLETK AKKGKAVRIE
Length:140
Mass (Da):16,178
Last modified:November 1, 1996 - v1
Checksum:i6597167BEA1E9FFF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D21196 Genomic DNA. Translation: BAA04735.1.
AB000109 Genomic DNA. Translation: BAA78071.1.
PIRiT43768.
RefSeqiNP_050089.1. NC_000895.1.

Genome annotation databases

GeneIDi2193917.
KEGGiddi:DidioMp22.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D21196 Genomic DNA. Translation: BAA04735.1.
AB000109 Genomic DNA. Translation: BAA78071.1.
PIRiT43768.
RefSeqiNP_050089.1. NC_000895.1.

3D structure databases

ProteinModelPortaliQ23886.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi2193917.
KEGGiddi:DidioMp22.

Organism-specific databases

dictyBaseiDDB_G0294074. mrps12.

Phylogenomic databases

InParanoidiQ23886.
OMAiMITINQI.
PhylomeDBiQ23886.

Miscellaneous databases

PROiQ23886.

Family and domain databases

CDDicd03368. Ribosomal_S12. 1 hit.
Gene3Di2.40.50.140. 1 hit.
InterProiIPR012340. NA-bd_OB-fold.
IPR006032. Ribosomal_S12/S23.
IPR005679. Ribosomal_S12_bac.
[Graphical view]
PANTHERiPTHR11652. PTHR11652. 1 hit.
PfamiPF00164. Ribosom_S12_S23. 1 hit.
[Graphical view]
PIRSFiPIRSF002133. Ribosomal_S12/S23. 1 hit.
PRINTSiPR01034. RIBOSOMALS12.
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00981. rpsL_bact. 1 hit.
PROSITEiPS00055. RIBOSOMAL_S12. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRT12_DICDI
AccessioniPrimary (citable) accession number: Q23886
Secondary accession number(s): Q9XPJ4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 4, 2007
Last sequence update: November 1, 1996
Last modified: September 7, 2016
This is version 98 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Dictyostelium discoideum
    Dictyostelium discoideum: entries, gene names and cross-references to dictyBase
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.