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Protein
Submitted name:

Uncharacterized protein

Gene

CELE_ZK430.7

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

SignaLinkiQ23494.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:CELE_ZK430.7Imported, ZK430.7Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome II

Organism-specific databases

WormBaseiZK430.7; CE05083; WBGene00022742.

PTM / Processingi

Proteomic databases

EPDiQ23494.
PaxDbiQ23494.

Interactioni

Protein-protein interaction databases

STRINGi6239.ZK430.7.2.

Structurei

3D structure databases

ProteinModelPortaliQ23494.
SMRiQ23494. Positions 61-371.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini62 – 359298WD_REPEATS_REGIONInterPro annotationAdd
BLAST

Keywords - Domaini

RepeatUniRule annotation, WD repeatUniRule annotation

Phylogenomic databases

eggNOGiKOG0268. Eukaryota.
ENOG410XNX6. LUCA.
GeneTreeiENSGT00390000005711.
HOGENOMiHOG000210082.
InParanoidiQ23494.
KOiK11806.
OMAiIQRVPRN.
PhylomeDBiQ23494.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
InterProiIPR007287. Sof1.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF04158. Sof1. 1 hit.
PF00400. WD40. 3 hits.
[Graphical view]
SMARTiSM00320. WD40. 6 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 1 hit.
PROSITEiPS00678. WD_REPEATS_1. 1 hit.
PS50082. WD_REPEATS_2. 3 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q23494-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKIKVISRNP NTYQRETTDK RNKIVRNFNT PADPFRSQVE YTRALNATKL
60 70 80 90 100
ERVFAKPFVA SLDGHVDGVQ VLAKHPNRPS TVFSGARDGQ VKIWNLASRE
110 120 130 140 150
CQATLDAHRG LVNDISIDNN NGENFVTVGQ DNQLKYWKIE GQQKTPAHSI
160 170 180 190 200
AMDGIVYGVS HLSFSSDFVT CGEDISVWKP YRETPLRSYN LGTDTIHTCR
210 220 230 240 250
ANPVEENVIV GARSDRSIYV LDTRQDVPLK KVTMKMRPNK ISWNPMEAYN
260 270 280 290 300
FTVASEDYSL YTFDMRYMEH PVQSHQGFTS AVLDVDYSPT GQEFVAAGYD
310 320 330 340 350
RSIRLFKARD MTSRDVYYTK RMASVLSVLW SADSKFVLSG SNEMNIRVWK
360 370 380 390 400
ANAAEKLGPL TKREKQAFAY NEKLRDTYKN HPEVRRIAKH RNVPRHIFTA
410 420 430 440
AKEHKLIRDA RGRRDFRRAK AAGLDEEESY LPQTQKIMVG DAEM
Length:444
Mass (Da):50,802
Last modified:November 1, 1996 - v1
Checksum:i8677DFDD2FDED230
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284602 Genomic DNA. Translation: CCD61674.1.
PIRiT27863.
RefSeqiNP_494781.1. NM_062380.3.
UniGeneiCel.13781.

Genome annotation databases

EnsemblMetazoaiZK430.7; ZK430.7; WBGene00022742.
GeneIDi173778.
KEGGicel:CELE_ZK430.7.
UCSCiZK430.7.1. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284602 Genomic DNA. Translation: CCD61674.1.
PIRiT27863.
RefSeqiNP_494781.1. NM_062380.3.
UniGeneiCel.13781.

3D structure databases

ProteinModelPortaliQ23494.
SMRiQ23494. Positions 61-371.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.ZK430.7.2.

Proteomic databases

EPDiQ23494.
PaxDbiQ23494.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiZK430.7; ZK430.7; WBGene00022742.
GeneIDi173778.
KEGGicel:CELE_ZK430.7.
UCSCiZK430.7.1. c. elegans.

Organism-specific databases

CTDi173778.
WormBaseiZK430.7; CE05083; WBGene00022742.

Phylogenomic databases

eggNOGiKOG0268. Eukaryota.
ENOG410XNX6. LUCA.
GeneTreeiENSGT00390000005711.
HOGENOMiHOG000210082.
InParanoidiQ23494.
KOiK11806.
OMAiIQRVPRN.
PhylomeDBiQ23494.

Enzyme and pathway databases

SignaLinkiQ23494.

Miscellaneous databases

NextBioi881057.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
InterProiIPR007287. Sof1.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF04158. Sof1. 1 hit.
PF00400. WD40. 3 hits.
[Graphical view]
SMARTiSM00320. WD40. 6 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 1 hit.
PROSITEiPS00678. WD_REPEATS_1. 1 hit.
PS50082. WD_REPEATS_2. 3 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiQ23494_CAEEL
AccessioniPrimary (citable) accession number: Q23494
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: May 11, 2016
This is version 121 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.