Q233G4 (Q233G4_TETTS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP dependent DNA ligase domain containing protein EMBL EAR91616.1
EC=6.5.1.1 EMBL EAR91616.1

Gene names

ORF Names:

TTHERM_00392850 EMBL EAR91616.1

Organism

Tetrahymena thermophila (strain SB210) [Reference proteome]

Taxonomic identifier

312017 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Alveolata › Ciliophora › Intramacronucleata › Oligohymenophorea › Hymenostomatida › Tetrahymenina › Tetrahymenidae › Tetrahymena › Tetrahymena thermophila

Protein attributes

Sequence length	555 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL EAR91616.1
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro lagging strand elongation Inferred from Biological aspect of Ancestor. Source: RefGenome nucleotide-excision repair Inferred from Biological aspect of Ancestor. Source: RefGenome
Cellular_component	chromosome Inferred from Biological aspect of Ancestor. Source: RefGenome
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from Biological aspect of Ancestor. Source: RefGenome
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q233G4 [UniParc]. Last modified April 18, 2006. Version 1. Checksum: 18799FAFAC545C87	FASTA	555	63,068
	10 20 30 40 50 60 MIKIDLTKPV FLNFNQSKFW EISLLDGNKS QIRYGKLVQG EEIEEKTQIV QKQHKDTDSC 70 80 90 100 110 120 LDYIIRVIEN KKLKGYSGDI PMKKNEPQII IPANNASGFS IQISAPKSVE NNANDDKDSK 130 140 150 160 170 180 VDSNTQAYLQ ENKTWSSQFV ILTLSGNEVE EIIGKLGIKK TWEKSSTILS ANQCKLYFKN 190 200 210 220 230 240 QIEEYERKGY VRDDSQYNFQ LNEVNKHFSA QNGSSNNNQL DLNQKGKKKN FNKDSGLYDD 250 260 270 280 290 300 SHSNISGISD QSDLTARSGG SQLDLSFDKG DDDDGNSSVV VTGEIKKGSL GANGSMDSGV 310 320 330 340 350 360 LLAQAMPDEM DPTGWYASEK MDGVRAVWTG KTFYSRNGNE FYPPPFFIQN FPNCTLDGEL 370 380 390 400 410 420 FTKRDDFQRC VGIVKTKNGN EEKDERWKDI VYLVYDCPKL LKPFKDRIKA LQEQIPKLGN 430 440 450 460 470 480 KYIKVLPHKI VESREQLESE LDRVLKNNGE GLMLRDPNSM YECRRSKTLL KVKTFTDEEA 490 500 510 520 530 540 TVIGSERGEG RCADMMGALV CRMKNGKEFK IGSGFNDDQR RRPPKKGSVI TFKYQNLTKD 550 GKPRFPIFLR IKEDE

References

[1]

"Macronuclear genome sequence of the ciliate Tetrahymena thermophila, a model eukaryote." Eisen J.A., Coyne R.S., Wu M., Wu D., Thiagarajan M., Wortman J.R., Badger J.H., Ren Q., Amedeo P., Jones K.M., Tallon L.J., Delcher A.L., Salzberg S.L., Silva J.C., Haas B.J., Majoros W.H., Farzad M., Carlton J.M. , Smith R.K. Jr., Garg J., Pearlman R.E., Karrer K.M., Sun L., Manning G., Elde N.C., Turkewitz A.P., Asai D.J., Wilkes D.E., Wang Y., Cai H., Collins K., Stewart B.A., Lee S.R., Wilamowska K., Weinberg Z., Ruzzo W.L., Wloga D., Gaertig J., Frankel J., Tsao C.-C., Gorovsky M.A., Keeling P.J., Waller R.F., Patron N.J., Cherry J.M., Stover N.A., Krieger C.J., del Toro C., Ryder H.F., Williamson S.C., Barbeau R.A., Hamilton E.P., Orias E. PLoS Biol. 4:1620-1642(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: SB210.

Cross-references

Sequence databases
EMBL GenBank DDBJ	GG662770 Genomic DNA. Translation: EAR91616.1.
RefSeq	XP_001011861.1. XM_001011861.1.
3D structure databases
ProteinModelPortal	Q233G4.
ModBase	Search...
Protein-protein interaction databases
STRING	5911.XP_001011861.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblProtists	EAR91616; EAR91616; TTHERM_00392850.
GeneID	7847151.
KEGG	tet:TTHERM_00392850.
Phylogenomic databases
KO	K01971.
ProtClustDB	CLSZ2445448.
Family and domain databases
Gene3D	2.20.140.10. 1 hit. 2.40.50.140. 1 hit.
InterPro	IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012340. NA-bd_OB-fold. IPR008893. WGR_domain. [Graphical view]
Pfam	PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
PROSITE	PS00333. DNA_LIGASE_A2. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q233G4_TETTS

Accession

Primary (citable) accession number: Q233G4

Entry history

Integrated into UniProtKB/TrEMBL:	April 18, 2006
Last sequence update:	April 18, 2006
Last modified:	April 3, 2013
This is version 50 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)