Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Q233G4

- Q233G4_TETTS

UniProt

Q233G4 - Q233G4_TETTS

Protein
Submitted name:

ATP-dependent DNA ligase

Gene

TTHERM_00392850

Organism
Tetrahymena thermophila (strain SB210)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 56 (01 Oct 2014)
      Sequence version 1 (18 Apr 2006)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: RefGenome

    GO - Biological processi

    1. DNA ligation Source: RefGenome
    2. DNA ligation involved in DNA repair Source: InterPro
    3. DNA recombination Source: InterPro
    4. lagging strand elongation Source: RefGenome
    5. nucleotide-excision repair Source: RefGenome

    Keywords - Molecular functioni

    LigaseImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligaseImported
    Gene namesi
    ORF Names:TTHERM_00392850Imported
    OrganismiTetrahymena thermophila (strain SB210)Imported
    Taxonomic identifieri312017 [NCBI]
    Taxonomic lineageiEukaryotaAlveolataCiliophoraIntramacronucleataOligohymenophoreaHymenostomatidaTetrahymeninaTetrahymenidaeTetrahymena
    ProteomesiUP000009168: Unassembled WGS sequence

    Subcellular locationi

    GO - Cellular componenti

    1. chromosome Source: RefGenome

    Interactioni

    Protein-protein interaction databases

    STRINGi5911.XP_001011861.

    Structurei

    3D structure databases

    ProteinModelPortaliQ233G4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.20.140.10. 1 hit.
    2.40.50.140. 1 hit.
    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    IPR008893. WGR_domain.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q233G4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MIKIDLTKPV FLNFNQSKFW EISLLDGNKS QIRYGKLVQG EEIEEKTQIV    50
    QKQHKDTDSC LDYIIRVIEN KKLKGYSGDI PMKKNEPQII IPANNASGFS 100
    IQISAPKSVE NNANDDKDSK VDSNTQAYLQ ENKTWSSQFV ILTLSGNEVE 150
    EIIGKLGIKK TWEKSSTILS ANQCKLYFKN QIEEYERKGY VRDDSQYNFQ 200
    LNEVNKHFSA QNGSSNNNQL DLNQKGKKKN FNKDSGLYDD SHSNISGISD 250
    QSDLTARSGG SQLDLSFDKG DDDDGNSSVV VTGEIKKGSL GANGSMDSGV 300
    LLAQAMPDEM DPTGWYASEK MDGVRAVWTG KTFYSRNGNE FYPPPFFIQN 350
    FPNCTLDGEL FTKRDDFQRC VGIVKTKNGN EEKDERWKDI VYLVYDCPKL 400
    LKPFKDRIKA LQEQIPKLGN KYIKVLPHKI VESREQLESE LDRVLKNNGE 450
    GLMLRDPNSM YECRRSKTLL KVKTFTDEEA TVIGSERGEG RCADMMGALV 500
    CRMKNGKEFK IGSGFNDDQR RRPPKKGSVI TFKYQNLTKD GKPRFPIFLR 550
    IKEDE 555
    Length:555
    Mass (Da):63,068
    Last modified:April 18, 2006 - v1
    Checksum:i18799FAFAC545C87
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GG662770 Genomic DNA. Translation: EAR91616.1.
    RefSeqiXP_001011861.1. XM_001011861.1.

    Genome annotation databases

    EnsemblProtistsiEAR91616; EAR91616; TTHERM_00392850.
    GeneIDi7847151.
    KEGGitet:TTHERM_00392850.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GG662770 Genomic DNA. Translation: EAR91616.1 .
    RefSeqi XP_001011861.1. XM_001011861.1.

    3D structure databases

    ProteinModelPortali Q233G4.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 5911.XP_001011861.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblProtistsi EAR91616 ; EAR91616 ; TTHERM_00392850 .
    GeneIDi 7847151.
    KEGGi tet:TTHERM_00392850.

    Phylogenomic databases

    KOi K01971.

    Family and domain databases

    Gene3Di 2.20.140.10. 1 hit.
    2.40.50.140. 1 hit.
    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    IPR008893. WGR_domain.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Macronuclear genome sequence of the ciliate Tetrahymena thermophila, a model eukaryote."
      Eisen J.A., Coyne R.S., Wu M., Wu D., Thiagarajan M., Wortman J.R., Badger J.H., Ren Q., Amedeo P., Jones K.M., Tallon L.J., Delcher A.L., Salzberg S.L., Silva J.C., Haas B.J., Majoros W.H., Farzad M., Carlton J.M.
      , Smith R.K. Jr., Garg J., Pearlman R.E., Karrer K.M., Sun L., Manning G., Elde N.C., Turkewitz A.P., Asai D.J., Wilkes D.E., Wang Y., Cai H., Collins K., Stewart B.A., Lee S.R., Wilamowska K., Weinberg Z., Ruzzo W.L., Wloga D., Gaertig J., Frankel J., Tsao C.-C., Gorovsky M.A., Keeling P.J., Waller R.F., Patron N.J., Cherry J.M., Stover N.A., Krieger C.J., del Toro C., Ryder H.F., Williamson S.C., Barbeau R.A., Hamilton E.P., Orias E.
      PLoS Biol. 4:1620-1642(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: SB210Imported.

    Entry informationi

    Entry nameiQ233G4_TETTS
    AccessioniPrimary (citable) accession number: Q233G4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 18, 2006
    Last sequence update: April 18, 2006
    Last modified: October 1, 2014
    This is version 56 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3