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Q233G4

- Q233G4_TETTS

UniProt

Q233G4 - Q233G4_TETTS

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Protein
Submitted name: ATP-dependent DNA ligase
Gene
TTHERM_00392850
Organism
Tetrahymena thermophila (strain SB210)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: RefGenome

GO - Biological processi

  1. DNA ligation Source: RefGenome
  2. DNA ligation involved in DNA repair Source: InterPro
  3. DNA recombination Source: InterPro
  4. lagging strand elongation Source: RefGenome
  5. nucleotide-excision repair Source: RefGenome
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
ORF Names:TTHERM_00392850Imported
OrganismiTetrahymena thermophila (strain SB210)Imported
Taxonomic identifieri312017 [NCBI]
Taxonomic lineageiEukaryotaAlveolataCiliophoraIntramacronucleataOligohymenophoreaHymenostomatidaTetrahymeninaTetrahymenidaeTetrahymena
ProteomesiUP000009168: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

  1. chromosome Source: RefGenome
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi5911.XP_001011861.

Structurei

3D structure databases

ProteinModelPortaliQ233G4.

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.20.140.10. 1 hit.
2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
IPR008893. WGR_domain.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q233G4-1 [UniParc]FASTAAdd to Basket

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MIKIDLTKPV FLNFNQSKFW EISLLDGNKS QIRYGKLVQG EEIEEKTQIV    50
QKQHKDTDSC LDYIIRVIEN KKLKGYSGDI PMKKNEPQII IPANNASGFS 100
IQISAPKSVE NNANDDKDSK VDSNTQAYLQ ENKTWSSQFV ILTLSGNEVE 150
EIIGKLGIKK TWEKSSTILS ANQCKLYFKN QIEEYERKGY VRDDSQYNFQ 200
LNEVNKHFSA QNGSSNNNQL DLNQKGKKKN FNKDSGLYDD SHSNISGISD 250
QSDLTARSGG SQLDLSFDKG DDDDGNSSVV VTGEIKKGSL GANGSMDSGV 300
LLAQAMPDEM DPTGWYASEK MDGVRAVWTG KTFYSRNGNE FYPPPFFIQN 350
FPNCTLDGEL FTKRDDFQRC VGIVKTKNGN EEKDERWKDI VYLVYDCPKL 400
LKPFKDRIKA LQEQIPKLGN KYIKVLPHKI VESREQLESE LDRVLKNNGE 450
GLMLRDPNSM YECRRSKTLL KVKTFTDEEA TVIGSERGEG RCADMMGALV 500
CRMKNGKEFK IGSGFNDDQR RRPPKKGSVI TFKYQNLTKD GKPRFPIFLR 550
IKEDE 555
Length:555
Mass (Da):63,068
Last modified:April 18, 2006 - v1
Checksum:i18799FAFAC545C87
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GG662770 Genomic DNA. Translation: EAR91616.1.
RefSeqiXP_001011861.1. XM_001011861.1.

Genome annotation databases

EnsemblProtistsiEAR91616; EAR91616; TTHERM_00392850.
GeneIDi7847151.
KEGGitet:TTHERM_00392850.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GG662770 Genomic DNA. Translation: EAR91616.1 .
RefSeqi XP_001011861.1. XM_001011861.1.

3D structure databases

ProteinModelPortali Q233G4.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 5911.XP_001011861.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblProtistsi EAR91616 ; EAR91616 ; TTHERM_00392850 .
GeneIDi 7847151.
KEGGi tet:TTHERM_00392850.

Phylogenomic databases

KOi K01971.

Family and domain databases

Gene3Di 2.20.140.10. 1 hit.
2.40.50.140. 1 hit.
InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
IPR008893. WGR_domain.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Macronuclear genome sequence of the ciliate Tetrahymena thermophila, a model eukaryote."
    Eisen J.A., Coyne R.S., Wu M., Wu D., Thiagarajan M., Wortman J.R., Badger J.H., Ren Q., Amedeo P., Jones K.M., Tallon L.J., Delcher A.L., Salzberg S.L., Silva J.C., Haas B.J., Majoros W.H., Farzad M., Carlton J.M.
    , Smith R.K. Jr., Garg J., Pearlman R.E., Karrer K.M., Sun L., Manning G., Elde N.C., Turkewitz A.P., Asai D.J., Wilkes D.E., Wang Y., Cai H., Collins K., Stewart B.A., Lee S.R., Wilamowska K., Weinberg Z., Ruzzo W.L., Wloga D., Gaertig J., Frankel J., Tsao C.-C., Gorovsky M.A., Keeling P.J., Waller R.F., Patron N.J., Cherry J.M., Stover N.A., Krieger C.J., del Toro C., Ryder H.F., Williamson S.C., Barbeau R.A., Hamilton E.P., Orias E.
    PLoS Biol. 4:1620-1642(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SB210.

Entry informationi

Entry nameiQ233G4_TETTS
AccessioniPrimary (citable) accession number: Q233G4
Entry historyi
Integrated into UniProtKB/TrEMBL: April 18, 2006
Last sequence update: April 18, 2006
Last modified: June 11, 2014
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3