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Protein
Submitted name:

Valyl Amino-acyl tRNA Synthetase

Gene

vars-1

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Aminoacyl-tRNA synthetaseUniRule annotationImported, Ligase

Keywords - Biological processi

Protein biosynthesisUniRule annotation

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
Valyl Amino-acyl tRNA SynthetaseImported
Gene namesi
Name:vars-1Imported
ORF Names:CELE_ZC513.4Imported, ZC513.4Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiZC513.4; CE45818; WBGene00006935; vars-1.

PTM / Processingi

Proteomic databases

EPDiQ23360.
PaxDbiQ23360.
PRIDEiQ23360.

Expressioni

Gene expression databases

BgeeiWBGene00006935.

Interactioni

Protein-protein interaction databases

STRINGi6239.ZC513.4.

Structurei

3D structure databases

ProteinModelPortaliQ23360.
SMRiQ23360. Positions 53-858.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini43 – 645603tRNA-synt_1InterPro annotationAdd
BLAST
Domaini691 – 834144Anticodon_1InterPro annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili946 – 97833Sequence analysisAdd
BLAST

Sequence similaritiesi

Belongs to the class-I aminoacyl-tRNA synthetase family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG0432. Eukaryota.
COG0525. LUCA.
GeneTreeiENSGT00550000074727.
HOGENOMiHOG000020094.
InParanoidiQ23360.
OMAiPEYQSHR.
OrthoDBiEOG091G01XH.

Family and domain databases

CDDicd07962. Anticodon_Ia_Val. 1 hit.
Gene3Di1.10.730.10. 2 hits.
3.40.50.620. 2 hits.
3.90.740.10. 1 hit.
InterProiIPR001412. aa-tRNA-synth_I_CS.
IPR002300. aa-tRNA-synth_Ia.
IPR033705. Anticodon_Ia_Val.
IPR013155. M/V/L/I-tRNA-synth_anticd-bd.
IPR014729. Rossmann-like_a/b/a_fold.
IPR009080. tRNAsynth_Ia_anticodon-bd.
IPR009008. Val/Leu/Ile-tRNA-synth_edit.
IPR002303. Valyl-tRNA_ligase.
[Graphical view]
PfamiPF08264. Anticodon_1. 1 hit.
PF00133. tRNA-synt_1. 1 hit.
[Graphical view]
PRINTSiPR00986. TRNASYNTHVAL.
SUPFAMiSSF47323. SSF47323. 1 hit.
SSF50677. SSF50677. 1 hit.
TIGRFAMsiTIGR00422. valS. 1 hit.
PROSITEiPS00178. AA_TRNA_LIGASE_I. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q23360-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGKLNRLALF HRSRRQCAYS PTIITRESSS SFNIDEVTQN FEQRTEFAAA
60 70 80 90 100
NYRKNGSLFR MVLPPPNVTG KLHLGHALTV AVEDAICRHQ RNQGNKAEWI
110 120 130 140 150
PGFDHAGIAT QVVVEKILAK NGKRRLEMTR EEFVKECHLW GEKCSSEIRQ
160 170 180 190 200
QLTRMGASLD WTQSYYTLDS KFSEAVTKAF CILEQEDLIT RGKRLVHWCP
210 220 230 240 250
TLSSTLSSQE VNRIDVPSDG YINLSSSSGT RRRVKFGQMH VIRYNLVDSE
260 270 280 290 300
SEFIEVGTTR PETLFADVAV AVHPEDDRYS KFHGKHVWSP VTPGRKLFVI
310 320 330 340 350
TDSAVSVEKG TGAVKITPSH DALDYEIWNR WILNAGQNTI EEFACIDAEG
360 370 380 390 400
KMTNSGEDFD GMDRFEAREK VIQKLSELGN YNGLMKHEGA QVNICSRTGD
410 420 430 440 450
IIEPRLTEQW FLDCKDMFAR SADAIKSGKI EVFPEYQSHR LADWFENQEP
460 470 480 490 500
WCLSRQLWWG HRIPAYNVPG QSKWMVTTDE EEARRELGDK MQQDPDVLDT
510 520 530 540 550
WFSSALVPLV KNGWLEGAPI QTPSLNVMET GWDISGFWVA RMIALNMKLS
560 570 580 590 600
SGETPFGKVV LHGLVRDNEG RKMSKSLGNV IDPLDVLDGI TFEKMIERVK
610 620 630 640 650
SSAHEKEEID NAVKDLTKRF PNGISRCGPD ALRFALLKYD VLSTDIPIDV
660 670 680 690 700
SNAAIEGLHF CNKIWNLAAY YDQLAEKCEV IKDVDSDRLV DEWIMARLST
710 720 730 740 750
TVSTVDAHMN KFSLHLALST LHKFITSDIC DIYLESTKKA LWNNDIARIR
760 770 780 790 800
EARSILQRVL QPTLVQLNAF MPFVSEYIYE RIFKRETGSI LFDVVKPSLF
810 820 830 840 850
IFHRNEELEE AMKLITAMMA AIRSTRQTLQ LPQRITFSGI LEMAPTDTSP
860 870 880 890 900
SELRILADEV TQTCGFELQK VCREVDEDIK KDHMACPVPG HDAKLWMRID
910 920 930 940 950
ADCKEMFILS LKRQLEKTKT RQEQFQARIA SYEAICENPN SKPSNVTKTK
960 970
RKAENARKVV ENAKEEAERI KQLILNQS
Length:978
Mass (Da):111,531
Last modified:May 3, 2011 - v3
Checksum:i6193297D2C09F874
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CCD64076.1.
RefSeqiNP_505070.3. NM_072669.4.
UniGeneiCel.38704.

Genome annotation databases

EnsemblMetazoaiZC513.4; ZC513.4; WBGene00006935.
GeneIDi179184.
KEGGicel:CELE_ZC513.4.
UCSCiZC513.4. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CCD64076.1.
RefSeqiNP_505070.3. NM_072669.4.
UniGeneiCel.38704.

3D structure databases

ProteinModelPortaliQ23360.
SMRiQ23360. Positions 53-858.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.ZC513.4.

Proteomic databases

EPDiQ23360.
PaxDbiQ23360.
PRIDEiQ23360.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiZC513.4; ZC513.4; WBGene00006935.
GeneIDi179184.
KEGGicel:CELE_ZC513.4.
UCSCiZC513.4. c. elegans.

Organism-specific databases

CTDi179184.
WormBaseiZC513.4; CE45818; WBGene00006935; vars-1.

Phylogenomic databases

eggNOGiKOG0432. Eukaryota.
COG0525. LUCA.
GeneTreeiENSGT00550000074727.
HOGENOMiHOG000020094.
InParanoidiQ23360.
OMAiPEYQSHR.
OrthoDBiEOG091G01XH.

Gene expression databases

BgeeiWBGene00006935.

Family and domain databases

CDDicd07962. Anticodon_Ia_Val. 1 hit.
Gene3Di1.10.730.10. 2 hits.
3.40.50.620. 2 hits.
3.90.740.10. 1 hit.
InterProiIPR001412. aa-tRNA-synth_I_CS.
IPR002300. aa-tRNA-synth_Ia.
IPR033705. Anticodon_Ia_Val.
IPR013155. M/V/L/I-tRNA-synth_anticd-bd.
IPR014729. Rossmann-like_a/b/a_fold.
IPR009080. tRNAsynth_Ia_anticodon-bd.
IPR009008. Val/Leu/Ile-tRNA-synth_edit.
IPR002303. Valyl-tRNA_ligase.
[Graphical view]
PfamiPF08264. Anticodon_1. 1 hit.
PF00133. tRNA-synt_1. 1 hit.
[Graphical view]
PRINTSiPR00986. TRNASYNTHVAL.
SUPFAMiSSF47323. SSF47323. 1 hit.
SSF50677. SSF50677. 1 hit.
TIGRFAMsiTIGR00422. valS. 1 hit.
PROSITEiPS00178. AA_TRNA_LIGASE_I. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ23360_CAEEL
AccessioniPrimary (citable) accession number: Q23360
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: May 3, 2011
Last modified: September 7, 2016
This is version 143 of the entry and version 3 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.