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Protein

40S ribosomal protein S7

Gene

rps-7

Organism
Caenorhabditis elegans
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-CEL-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-CEL-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-CEL-6791226. Major pathway of rRNA processing in the nucleolus and cytosol.
R-CEL-72689. Formation of a pool of free 40S subunits.
R-CEL-72695. Formation of the ternary complex, and subsequently, the 43S complex.
R-CEL-72702. Ribosomal scanning and start codon recognition.
R-CEL-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-CEL-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S7
Gene namesi
Name:rps-7
ORF Names:ZC434.2
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome I

Organism-specific databases

WormBaseiZC434.2; CE06577; WBGene00004476; rps-7.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001742041 – 19440S ribosomal protein S7Add BLAST194

Proteomic databases

EPDiQ23312.
PaxDbiQ23312.
PeptideAtlasiQ23312.
PRIDEiQ23312.

Expressioni

Gene expression databases

BgeeiWBGene00004476.

Interactioni

Protein-protein interaction databases

BioGridi38318. 6 interactors.
DIPiDIP-26439N.
IntActiQ23312. 3 interactors.
MINTiMINT-211847.
STRINGi6239.ZC434.2.2.

Structurei

3D structure databases

ProteinModelPortaliQ23312.
SMRiQ23312.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG3320. Eukaryota.
ENOG410ZYKB. LUCA.
GeneTreeiENSGT00390000014122.
HOGENOMiHOG000197237.
InParanoidiQ23312.
KOiK02993.
OMAiGFHRVQQ.
OrthoDBiEOG091G0L94.
PhylomeDBiQ23312.

Family and domain databases

InterProiView protein in InterPro
IPR000554. Ribosomal_S7e.
PANTHERiPTHR11278. PTHR11278. 1 hit.
PfamiView protein in Pfam
PF01251. Ribosomal_S7e. 1 hit.
PROSITEiView protein in PROSITE
PS00948. RIBOSOMAL_S7E. 1 hit.

Sequencei

Sequence statusi: Complete.

Q23312-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPEIIGKLLK SDGKVVSEIE KQVSQALIDL ETNDDVQSQL KELYIVGVKE
60 70 80 90 100
VELGNKSAII IYVPVPQLKA FHKIHPALVR ELEKKFGGRD ILILAKRRIL
110 120 130 140 150
PKPQRGSKAR PQKQKRPRSR TLTAVHDAWL DELVYPAEVV GRRIRVKLDG
160 170 180 190
KKVYKVHLDK SHQTNVGHKI GVFASVYRKL TGKDVTFEFP DPIF
Length:194
Mass (Da):22,058
Last modified:November 1, 1996 - v1
Checksum:i38C8EF443831029C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z75714 Genomic DNA. Translation: CAB00058.1.
PIRiT27565.
RefSeqiNP_492708.1. NM_060307.3.
UniGeneiCel.6314.

Genome annotation databases

EnsemblMetazoaiZC434.2; ZC434.2; WBGene00004476.
GeneIDi172901.
KEGGicel:CELE_ZC434.2.
UCSCiZC434.2.1. c. elegans.

Similar proteinsi

Entry informationi

Entry nameiRS7_CAEEL
AccessioniPrimary (citable) accession number: Q23312
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 21, 2004
Last sequence update: November 1, 1996
Last modified: November 22, 2017
This is version 117 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families