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Unreviewed, UniProtKB/TrEMBL Q23158 (Q23158_CAEEL)

Last modified June 16, 2009. Version 74. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Binary interactions · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesSubmitted name:
    Protein W04D2.1a, confirmed by transcript evidence EMBL CAA99941.1
Gene names
Name: atn-1 EMBL CAA99941.1
ORF Names: W04D2.1 WormPep W04D2.1a, W04D2.1a EMBL CAA99941.1
OrganismCaenorhabditis elegans [Complete proteome]
Taxonomic identifier6239 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

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Protein attributes

Sequence length920 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at protein level.

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Sequences

Sequence LengthMass (Da)Tools
Q23158-1 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: 5B8AF3F897B1146E

FASTA920107,180
        10         20         30         40         50         60 
MVDYYQQPPS YHQPGYDYTQ QEEEWDREGL LDPAWEKQQK KTFTAWCNSH LRKAGTSIDT 

        70         80         90        100        110        120 
IEEDFRNGLK LMLLLEVISG EPLPKPDRGK MRFHKIANVN KALEYIESKG VKLVSIGAEE 

       130        140        150        160        170        180 
IVDGNVKMTL GLIWTIILRF AIQDINVEEL SARDGLLLWC QRKTAPYNNV NVQNFHNSWK 

       190        200        210        220        230        240 
DGLAFCALIH RHRPDLLDYS QLHKGDPIHN LNLAFDIAEK HLDIPKMLDA EDVSRHPDEK 

       250        260        270        280        290        300 
STMTYVSCFY HAFRNMRDPP PPVIRQPPPQ RVVVAPPPER DWRKDAETAA NRICRVLKVN 

       310        320        330        340        350        360 
QENEKMMEDY ENLASDLLAW INRWMPWLAN RSTDDTLQQA QQKLEDYRNY RRREKPPRIE 

       370        380        390        400        410        420 
DKGRLETLFN TLQTRLRLSN RPAFLPRDGH LIKDINAAWA GLEDSEKGFE EWLLSEIMRL 

       430        440        450        460        470        480 
ERLEHLAEKF RRKCALHEEW AHGKEDALRS NDWRSCGLYK IKALRKRHEA FESDLGAHQD 

       490        500        510        520        530        540 
RVEQIAAIAR ELNNLRYPDI GPINARCQAI CSQWDRLGQL SSKRRETLED AERIAERLDS 

       550        560        570        580        590        600 
LYLDFAKRAA PFNNWLDGAR EDLADLVIVH EMREIEELVN AHDQFKSTLG DADREFSSIN 

       610        620        630        640        650        660 
QIEHEVEHLV TSHGLDRELL RNPYTDLSAS DIRRKWGEVQ NSVPRRDSQL QAELKRQQNN 

       670        680        690        700        710        720 
ERLRTIFAEK ANQVGPWLER ELEQVLAIGL GGRGRLEDAI QQLRSIQRNV LGYKPNLDEL 

       730        740        750        760        770        780 
ERVHQEMQEN FVFENRKSRY SMESLRVGWE TLLTSINKTI NEFENQVLLR DSKGISEEQI 

       790        800        810        820        830        840 
AEFRASFSHF DKERAGLDPE QLRSCLISVG YTIRPGREGD AELHRVLAHV DPNRMGRVPF 

       850        860        870        880        890        900 
EAFLDFMTKE NSDQDTVEQM IDSFRILASG KTFITADELE RELPRDQAAY CMARMAPSRE 

       910        920 
PGAPPRSFDY VTFSRSLYSQ

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References

[1]"Genome sequence of the nematode C. elegans: a platform for investigating biology."
The C. elegans sequencing consortium
Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Bristol N2.

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Cross-references

Sequence databases

Z75552 Genomic DNA. Translation: CAA99941.1.
PIRT26147.
RefSeqNP_506127.1.
UniGeneCel.6231

3D structure databases

HSSPHSSP built from PDB template 1BKR based on UniProtKB Q01082.
ModBaseSearch...

Protein-protein interaction databases

DIPDIP:25407N.
IntActQ23158. 103 interactions.

Genome annotation databases

EnsemblW04D2.1. Caenorhabditis elegans. [Contig view]
GeneID179709.
KEGGcel:W04D2.1.

Organism-specific databases

WormBaseWBGene00000228. atn-1.
WormPepW04D2.1a. CE06539. [WorfDB]

Phylogenomic databases

OMAQ23158. DINTKWD.

Gene expression databases

ArrayExpressQ23158.

Family and domain databases

InterProIPR001589. Actinin_actin-bd_CS.
IPR001715. Calponin_act_bd.
IPR014837. EF-hand_Ca_insen.
IPR011992. EF-Hand_type.
IPR018249. EF_HAND_2.
IPR002048. EF_hand_Ca_bd.
IPR018159. Spectrin/alpha-actinin.
IPR002017. Spectrin_repeat.
[Graphical view]
Gene3DG3DSA:1.10.418.10. Calponin-homology. 2 hits.
G3DSA:1.10.238.10. EF-Hand_type. 2 hits.
PfamPF00307. CH. 2 hits.
PF08726. efhand_Ca_insen. 1 hit.
PF00435. Spectrin. 4 hits.
[Graphical view]
ProDomPD000012. EF-hand. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTSM00033. CH. 2 hits.
SM00054. EFh. 2 hits.
SM00150. SPEC. 2 hits.
[Graphical view]
PROSITEPS00019. ACTININ_1. 1 hit.
PS00020. ACTININ_2. 1 hit.
PS50021. CH. 2 hits.
PS50222. EF_HAND_2. 2 hits.
[Graphical view]
ProtoNetSearch...

Other Resources

NextBio906540.

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Entry information

Entry nameQ23158_CAEEL
AccessionPrimary (citable) accession number: Q23158
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: June 16, 2009
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Binary interactions · Sequences · References · Cross-references · Entry information