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Protein

Serpentine receptor class gamma

Gene

srg-25

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

ReceptorImported

Names & Taxonomyi

Protein namesi
Recommended name:
Serpentine receptor class gammaUniRule annotation
Gene namesi
Name:srg-25Imported
ORF Names:CELE_T09D3.5Imported, T09D3.5Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiT09D3.5; CE45086; WBGene00005182; srg-25.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei46 – 7126HelicalUniRule annotationAdd
BLAST
Transmembranei83 – 10523HelicalUniRule annotationAdd
BLAST
Transmembranei142 – 16423HelicalUniRule annotationAdd
BLAST
Transmembranei176 – 19520HelicalUniRule annotationAdd
BLAST
Transmembranei215 – 23521HelicalUniRule annotationAdd
BLAST
Transmembranei256 – 28833HelicalUniRule annotationAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1717Sequence analysisAdd
BLAST
Chaini18 – 366349Serpentine receptor class gammaSequence analysisPRO_5004201451Add
BLAST

Proteomic databases

PaxDbiQ23035.

Interactioni

Protein-protein interaction databases

STRINGi6239.T09D3.5.

Structurei

3D structure databases

ProteinModelPortaliQ23035.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the nematode receptor-like protein srg family.UniRule annotation

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixUniRule annotation

Phylogenomic databases

eggNOGiENOG410KAV3. Eukaryota.
ENOG4110HWV. LUCA.
GeneTreeiENSGT00530000064349.
InParanoidiQ23035.
OMAiANRFTCV.
OrthoDBiEOG7FZ036.
PhylomeDBiQ23035.

Family and domain databases

InterProiIPR000609. 7TM_GPCR_serpentine_rcpt_Srg.
[Graphical view]
PfamiPF02118. Srg. 1 hit.
[Graphical view]
PRINTSiPR00698. TMPROTEINSRG.

Sequencei

Sequence statusi: Complete.

Q23035-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLLFIILFIM NKTSIISFDY LEEMEELPDP AIRTCNYQFN TVSTQVVMYV
60 70 80 90 100
LQVGYALPVS ILYLFVILKI LRAHKSEQMF SDAYFKIYVL DGVVSLIVVI
110 120 130 140 150
LDYGLTRPLI YINPLCFLFW NWFPEPTYIL TPYLFGFNYF QFAKIFSISL
160 170 180 190 200
LSANRFTCVA YPIWHKVFWK KHTNNVIIVS LICPALFTWQ LAISPTRFDP
210 220 230 240 250
YVGEGILGYV KVVPFVRTTF FKLIVSLSAF IFMLITNIKT YQLTKKFKNK
260 270 280 290 300
LKSLELSLTL ATVVISAVFV IYIIIQAVLL IFSTSFLVEN LSFGSTLKKI
310 320 330 340 350
EFICNDFYLM SSPIVLIIMN KRLRGSLFKV APGMTQNSSA PRMSTTNENT
360
VRIIVKSPPA KTITMW
Length:366
Mass (Da):42,166
Last modified:August 10, 2010 - v3
Checksum:i53FF3CF5F209697F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CCD64174.1.
RefSeqiNP_504424.3. NM_072023.3.
UniGeneiCel.27645.

Genome annotation databases

EnsemblMetazoaiT09D3.5; T09D3.5; WBGene00005182.
GeneIDi188326.
KEGGicel:CELE_T09D3.5.
UCSCiT09D3.5. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CCD64174.1.
RefSeqiNP_504424.3. NM_072023.3.
UniGeneiCel.27645.

3D structure databases

ProteinModelPortaliQ23035.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.T09D3.5.

Proteomic databases

PaxDbiQ23035.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiT09D3.5; T09D3.5; WBGene00005182.
GeneIDi188326.
KEGGicel:CELE_T09D3.5.
UCSCiT09D3.5. c. elegans.

Organism-specific databases

CTDi188326.
WormBaseiT09D3.5; CE45086; WBGene00005182; srg-25.

Phylogenomic databases

eggNOGiENOG410KAV3. Eukaryota.
ENOG4110HWV. LUCA.
GeneTreeiENSGT00530000064349.
InParanoidiQ23035.
OMAiANRFTCV.
OrthoDBiEOG7FZ036.
PhylomeDBiQ23035.

Miscellaneous databases

NextBioi938400.

Family and domain databases

InterProiIPR000609. 7TM_GPCR_serpentine_rcpt_Srg.
[Graphical view]
PfamiPF02118. Srg. 1 hit.
[Graphical view]
PRINTSiPR00698. TMPROTEINSRG.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiQ23035_CAEEL
AccessioniPrimary (citable) accession number: Q23035
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: August 10, 2010
Last modified: December 9, 2015
This is version 91 of the entry and version 3 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.UniRule annotation

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.