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Protein

Serpentine receptor class gamma

Gene

srg-28

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

ReceptorImported

Names & Taxonomyi

Protein namesi
Recommended name:
Serpentine receptor class gammaUniRule annotation
Gene namesi
Name:srg-28Imported
ORF Names:CELE_T09D3.2Imported, T09D3.2Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiT09D3.2; CE33311; WBGene00005185; srg-28.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei34 – 5219HelicalUniRule annotationAdd
BLAST
Transmembranei64 – 8724HelicalUniRule annotationAdd
BLAST
Transmembranei157 – 18024HelicalUniRule annotationAdd
BLAST
Transmembranei200 – 22021HelicalUniRule annotationAdd
BLAST
Transmembranei241 – 26020HelicalUniRule annotationAdd
BLAST
Transmembranei280 – 30021HelicalUniRule annotationAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiQ23034.

Structurei

3D structure databases

ProteinModelPortaliQ23034.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the nematode receptor-like protein srg family.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixUniRule annotation

Phylogenomic databases

eggNOGiENOG410JJE6. Eukaryota.
ENOG41113MH. LUCA.
GeneTreeiENSGT00530000064349.
HOGENOMiHOG000126273.
InParanoidiQ23034.
OMAiITFVISH.
OrthoDBiEOG7ZWD5R.
PhylomeDBiQ23034.

Family and domain databases

InterProiIPR000609. 7TM_GPCR_serpentine_rcpt_Srg.
[Graphical view]
PfamiPF02118. Srg. 1 hit.
[Graphical view]
PRINTSiPR00698. TMPROTEINSRG.

Sequencei

Sequence statusi: Complete.

Q23034-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSDIIATNNA IRDSVSCDSG ESNVKQYLKL SLQLAYVLPL GFLYLSFLML
60 70 80 90 100
IVKKRKVPGV FEDSFFTLHL VDGVITLYFL VLNTSFFRVT SYVRPVCEFL
110 120 130 140 150
VPLLKDPSYI LTPFYTSYMY AQLAKMLSTL AMSINRYTSV NNPVQHKMIW
160 170 180 190 200
MKYSSKAIAL IFIIPLFGVW PVAIGNTSFL PFNGNGYIAY EHVFSWARTS
210 220 230 240 250
YGRLALSIPT IAFIIYSSII TSTKLRKLGG HMKKVEFSMN VATIFTSCGF
260 270 280 290 300
VSVVVLQFLY LKIDTNTVSN EVGMTKLIMA ATQLSNDFYM LSGPAVLVIL
310 320 330
EKRMRSSFRC CTQTVSSSGR RTNGSVQPIT FVISH
Length:335
Mass (Da):37,647
Last modified:June 1, 2003 - v2
Checksum:i9EED6B26EBB713DC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CCD64169.1.
PIRiT34444.
RefSeqiNP_872227.1. NM_182427.1.
UniGeneiCel.28949.

Genome annotation databases

EnsemblMetazoaiT09D3.2; T09D3.2; WBGene00005185.
GeneIDi353464.
KEGGicel:CELE_T09D3.2.
UCSCiT09D3.2. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CCD64169.1.
PIRiT34444.
RefSeqiNP_872227.1. NM_182427.1.
UniGeneiCel.28949.

3D structure databases

ProteinModelPortaliQ23034.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PaxDbiQ23034.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiT09D3.2; T09D3.2; WBGene00005185.
GeneIDi353464.
KEGGicel:CELE_T09D3.2.
UCSCiT09D3.2. c. elegans.

Organism-specific databases

CTDi353464.
WormBaseiT09D3.2; CE33311; WBGene00005185; srg-28.

Phylogenomic databases

eggNOGiENOG410JJE6. Eukaryota.
ENOG41113MH. LUCA.
GeneTreeiENSGT00530000064349.
HOGENOMiHOG000126273.
InParanoidiQ23034.
OMAiITFVISH.
OrthoDBiEOG7ZWD5R.
PhylomeDBiQ23034.

Miscellaneous databases

NextBioi953767.

Family and domain databases

InterProiIPR000609. 7TM_GPCR_serpentine_rcpt_Srg.
[Graphical view]
PfamiPF02118. Srg. 1 hit.
[Graphical view]
PRINTSiPR00698. TMPROTEINSRG.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiQ23034_CAEEL
AccessioniPrimary (citable) accession number: Q23034
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: June 1, 2003
Last modified: March 16, 2016
This is version 83 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.UniRule annotation

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.