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Q22979

- Q22979_CAEEL

UniProt

Q22979 - Q22979_CAEEL

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Protein
Submitted name: Protein HIS-39
Gene
his-39, CELE_F45F2.2, F45F2.2
Organism
Caenorhabditis elegans
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. DNA binding Source: UniProtKB-KW

GO - Biological processi

  1. nucleosome assembly Source: InterPro
Complete GO annotation...

Keywords - Ligandi

DNA-binding

Names & Taxonomyi

Protein namesi
Submitted name:
Protein HIS-39Imported
Gene namesi
Name:his-39Imported
ORF Names:CELE_F45F2.2Imported, F45F2.2Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
ProteomesiUP000001940: Chromosome V

Organism-specific databases

WormBaseiF45F2.2; CE36851; WBGene00001913; his-39.

Subcellular locationi

Nucleus. Chromosome By similarity SAAS annotations

GO - Cellular componenti

  1. nucleosome Source: UniProtKB-KW
  2. nucleus Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Chromosome, Nucleosome coreSAAS annotations, NucleusSAAS annotations

PTM / Processingi

Keywords - PTMi

Isopeptide bondSAAS annotations

Proteomic databases

PaxDbiQ22979.
PRIDEiQ22979.

Interactioni

Protein-protein interaction databases

STRINGi6239.F45F2.2.

Structurei

3D structure databases

ProteinModelPortaliQ22979.
SMRiQ22979. Positions 17-108.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG289161.
GeneTreeiENSGT00730000110319.
HOGENOMiHOG000231213.
InParanoidiQ22979.
KOiK11252.
OMAiPAKESYS.
OrthoDBiEOG72VH8J.
PhylomeDBiQ22979.

Family and domain databases

Gene3Di1.10.20.10. 1 hit.
InterProiIPR009072. Histone-fold.
IPR007125. Histone_core_D.
IPR000558. Histone_H2B.
[Graphical view]
PANTHERiPTHR23428. PTHR23428. 1 hit.
PfamiPF00125. Histone. 1 hit.
[Graphical view]
PRINTSiPR00621. HISTONEH2B.
SMARTiSM00427. H2B. 1 hit.
[Graphical view]
SUPFAMiSSF47113. SSF47113. 1 hit.

Sequencei

Sequence statusi: Complete.

Q22979-1 [UniParc]FASTAAdd to Basket

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MNCCKIFKYL TPNFLHKESY SLYIFRVLKQ VHPDTGVSSK AMSIMNSFVN    50
DVFERIAAEA SRLAHYNKRS TISSREIQTA VRLILPGELA KNAVSEGTNA 100
VTKYTSSK 108
Length:108
Mass (Da):12,164
Last modified:August 16, 2004 - v2
Checksum:iEB1D79C36513C6F0
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FO081223 Genomic DNA. Translation: CCD70019.1.
PIRiT28965.
RefSeqiNP_505201.2. NM_072800.2.
UniGeneiCel.28729.

Genome annotation databases

EnsemblMetazoaiF45F2.2; F45F2.2; WBGene00001913.
GeneIDi191681.
KEGGicel:CELE_F45F2.2.
UCSCiF45F2.2. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FO081223 Genomic DNA. Translation: CCD70019.1 .
PIRi T28965.
RefSeqi NP_505201.2. NM_072800.2.
UniGenei Cel.28729.

3D structure databases

ProteinModelPortali Q22979.
SMRi Q22979. Positions 17-108.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 6239.F45F2.2.

Proteomic databases

PaxDbi Q22979.
PRIDEi Q22979.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblMetazoai F45F2.2 ; F45F2.2 ; WBGene00001913 .
GeneIDi 191681.
KEGGi cel:CELE_F45F2.2.
UCSCi F45F2.2. c. elegans.

Organism-specific databases

CTDi 191681.
WormBasei F45F2.2 ; CE36851 ; WBGene00001913 ; his-39.

Phylogenomic databases

eggNOGi NOG289161.
GeneTreei ENSGT00730000110319.
HOGENOMi HOG000231213.
InParanoidi Q22979.
KOi K11252.
OMAi PAKESYS.
OrthoDBi EOG72VH8J.
PhylomeDBi Q22979.

Miscellaneous databases

NextBioi 949948.

Family and domain databases

Gene3Di 1.10.20.10. 1 hit.
InterProi IPR009072. Histone-fold.
IPR007125. Histone_core_D.
IPR000558. Histone_H2B.
[Graphical view ]
PANTHERi PTHR23428. PTHR23428. 1 hit.
Pfami PF00125. Histone. 1 hit.
[Graphical view ]
PRINTSi PR00621. HISTONEH2B.
SMARTi SM00427. H2B. 1 hit.
[Graphical view ]
SUPFAMi SSF47113. SSF47113. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    The C. elegans sequencing consortium
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2.

Entry informationi

Entry nameiQ22979_CAEEL
AccessioniPrimary (citable) accession number: Q22979
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: August 16, 2004
Last modified: July 9, 2014
This is version 125 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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