Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q22979 (Q22979_CAEEL) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 125. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:his-39 EMBL CCD70019.1 WormBase F45F2.2
ORF Names:CELE_F45F2.2 EMBL CCD70019.1, F45F2.2 WormBase F45F2.2
OrganismCaenorhabditis elegans [Reference proteome] EMBL CCD70019.1
Taxonomic identifier6239 [NCBI]
Taxonomic lineageEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis

Protein attributes

Sequence length108 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Subcellular location

Nucleus. Chromosome By similarity SAAS SAAS000558.

Ontologies

Keywords
   Cellular componentChromosome
Nucleosome core SAAS SAAS000558
Nucleus SAAS SAAS000558
   LigandDNA-binding
   PTMIsopeptide bond SAAS SAAS000558
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processnucleosome assembly

Inferred from electronic annotation. Source: InterPro

   Cellular_componentnucleosome

Inferred from electronic annotation. Source: UniProtKB-KW

nucleus

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functionDNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q22979 [UniParc].

Last modified August 16, 2004. Version 2.
Checksum: EB1D79C36513C6F0

FASTA10812,164
        10         20         30         40         50         60 
MNCCKIFKYL TPNFLHKESY SLYIFRVLKQ VHPDTGVSSK AMSIMNSFVN DVFERIAAEA 

        70         80         90        100 
SRLAHYNKRS TISSREIQTA VRLILPGELA KNAVSEGTNA VTKYTSSK 

« Hide

References

[1]"Genome sequence of the nematode C. elegans: a platform for investigating biology."
The C. elegans sequencing consortium
Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Bristol N2.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FO081223 Genomic DNA. Translation: CCD70019.1.
PIRT28965.
RefSeqNP_505201.2. NM_072800.2.
UniGeneCel.28729.

3D structure databases

ProteinModelPortalQ22979.
SMRQ22979. Positions 17-108.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING6239.F45F2.2.

Proteomic databases

PaxDbQ22979.
PRIDEQ22979.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaF45F2.2; F45F2.2; WBGene00001913.
GeneID191681.
KEGGcel:CELE_F45F2.2.
UCSCF45F2.2. c. elegans.

Organism-specific databases

CTD191681.
WormBaseF45F2.2; CE36851; WBGene00001913; his-39.

Phylogenomic databases

eggNOGNOG289161.
GeneTreeENSGT00730000110319.
HOGENOMHOG000231213.
InParanoidQ22979.
KOK11252.
OMAPAKESYS.
OrthoDBEOG72VH8J.
PhylomeDBQ22979.

Family and domain databases

Gene3D1.10.20.10. 1 hit.
InterProIPR009072. Histone-fold.
IPR007125. Histone_core_D.
IPR000558. Histone_H2B.
[Graphical view]
PANTHERPTHR23428. PTHR23428. 1 hit.
PfamPF00125. Histone. 1 hit.
[Graphical view]
PRINTSPR00621. HISTONEH2B.
SMARTSM00427. H2B. 1 hit.
[Graphical view]
SUPFAMSSF47113. SSF47113. 1 hit.
ProtoNetSearch...

Other

NextBio949948.

Entry information

Entry nameQ22979_CAEEL
AccessionPrimary (citable) accession number: Q22979
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: August 16, 2004
Last modified: July 9, 2014
This is version 125 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)