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Protein
Submitted name:

RH (Rhesus) antigen Related

Gene

rhr-1

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

ReactomeiR-CEL-1237044. Erythrocytes take up carbon dioxide and release oxygen.
R-CEL-1247673. Erythrocytes take up oxygen and release carbon dioxide.
R-CEL-444411. Rhesus glycoproteins mediate ammonium transport.

Names & Taxonomyi

Protein namesi
Submitted name:
RH (Rhesus) antigen RelatedImported
Gene namesi
Name:rhr-1Imported
ORF Names:CELE_F08F3.3Imported, F08F3.3Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiF08F3.3; CE09259; WBGene00004358; rhr-1.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei12 – 3120HelicalSequence analysisAdd
BLAST
Transmembranei51 – 7020HelicalSequence analysisAdd
BLAST
Transmembranei77 – 9822HelicalSequence analysisAdd
BLAST
Transmembranei118 – 13720HelicalSequence analysisAdd
BLAST
Transmembranei144 – 16623HelicalSequence analysisAdd
BLAST
Transmembranei172 – 19322HelicalSequence analysisAdd
BLAST
Transmembranei205 – 22420HelicalSequence analysisAdd
BLAST
Transmembranei244 – 26219HelicalSequence analysisAdd
BLAST
Transmembranei274 – 29320HelicalSequence analysisAdd
BLAST
Transmembranei299 – 31618HelicalSequence analysisAdd
BLAST
Transmembranei337 – 35418HelicalSequence analysisAdd
BLAST
Transmembranei390 – 41122HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

EPDiQ22947.
PaxDbiQ22947.

Expressioni

Gene expression databases

ExpressionAtlasiQ22947. baseline and differential.

Interactioni

Protein-protein interaction databases

DIPiDIP-26222N.
MINTiMINT-1056679.
STRINGi6239.F08F3.3.2.

Structurei

3D structure databases

ProteinModelPortaliQ22947.
SMRiQ22947. Positions 9-434.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini20 – 425406Ammonium_transpInterPro annotationAdd
BLAST

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

eggNOGiKOG3796. Eukaryota.
ENOG410XTF8. LUCA.
GeneTreeiENSGT00390000005787.
HOGENOMiHOG000007656.
InParanoidiQ22947.
KOiK06580.
OMAiTHIYPAM.
PhylomeDBiQ22947.

Family and domain databases

Gene3Di1.10.3430.10. 2 hits.
InterProiIPR029020. Ammonium/urea_transptr.
IPR001905. Ammonium_transpt.
IPR024041. NH4_transpt_AmtB-like_dom.
IPR002229. RhesusRHD.
[Graphical view]
PANTHERiPTHR11730. PTHR11730. 1 hit.
PfamiPF00909. Ammonium_transp. 1 hit.
[Graphical view]
PRINTSiPR00342. RHESUSRHD.
SUPFAMiSSF111352. SSF111352. 1 hit.

Sequencei

Sequence statusi: Complete.

Q22947-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRSPLHQNQL TLILGLFQVV FLVIFALYGS YDASALPSET KNVEEAARMT
60 70 80 90 100
NLYPLFQDTH VMIFIGFGFL MTFLKRYGFS AVSINMLLAV FTIQWGIIVR
110 120 130 140 150
GMASAHHGFK FTISLEQLLT ADFAAAVILI SMGAMLGKLS PSQYVIMAFF
160 170 180 190 200
ETPVALIVEH ICVHNLQIND VGGSIIVHAF GAYFGLACAK GFGKKEQRGH
210 220 230 240 250
TNEGSTYHTD IFAMIGAIFL WIYWPSFNAA VAATDDARQR AVANTFLSLC
260 270 280 290 300
ACTMTTFLVS QAVDKHKRFD MVHIANSTLA GGVAIGTTAN VVLEPYHAMI
310 320 330 340 350
IGVIAGAVSV IGYKYITPFL SEKLGIHDTC GVNNLHGMPG LIAGFASIAF
360 370 380 390 400
LFIYDETRYP AQYDKIYPGM ARGEDRTRMF DEKTQALNQL MAIGLVFLAS
410 420 430 440 450
TVSGYLTGLL LKLKIWDQVR DDEYYADGDY FETPGDYDFT SRIVTSVKQI
460
EVAEYNPLSQ KEV
Length:463
Mass (Da):51,093
Last modified:November 1, 1996 - v1
Checksum:i09F07FFB3A04D096
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CCD65593.1.
PIRiT29442.
RefSeqiNP_504436.1. NM_072035.5.
UniGeneiCel.19484.

Genome annotation databases

EnsemblMetazoaiF08F3.3.1; F08F3.3.1; WBGene00004358.
F08F3.3.2; F08F3.3.2; WBGene00004358.
GeneIDi178927.
KEGGicel:CELE_F08F3.3.
UCSCiF08F3.3.1. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CCD65593.1.
PIRiT29442.
RefSeqiNP_504436.1. NM_072035.5.
UniGeneiCel.19484.

3D structure databases

ProteinModelPortaliQ22947.
SMRiQ22947. Positions 9-434.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-26222N.
MINTiMINT-1056679.
STRINGi6239.F08F3.3.2.

Proteomic databases

EPDiQ22947.
PaxDbiQ22947.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiF08F3.3.1; F08F3.3.1; WBGene00004358.
F08F3.3.2; F08F3.3.2; WBGene00004358.
GeneIDi178927.
KEGGicel:CELE_F08F3.3.
UCSCiF08F3.3.1. c. elegans.

Organism-specific databases

CTDi178927.
WormBaseiF08F3.3; CE09259; WBGene00004358; rhr-1.

Phylogenomic databases

eggNOGiKOG3796. Eukaryota.
ENOG410XTF8. LUCA.
GeneTreeiENSGT00390000005787.
HOGENOMiHOG000007656.
InParanoidiQ22947.
KOiK06580.
OMAiTHIYPAM.
PhylomeDBiQ22947.

Enzyme and pathway databases

ReactomeiR-CEL-1237044. Erythrocytes take up carbon dioxide and release oxygen.
R-CEL-1247673. Erythrocytes take up oxygen and release carbon dioxide.
R-CEL-444411. Rhesus glycoproteins mediate ammonium transport.

Miscellaneous databases

NextBioi903154.

Gene expression databases

ExpressionAtlasiQ22947. baseline and differential.

Family and domain databases

Gene3Di1.10.3430.10. 2 hits.
InterProiIPR029020. Ammonium/urea_transptr.
IPR001905. Ammonium_transpt.
IPR024041. NH4_transpt_AmtB-like_dom.
IPR002229. RhesusRHD.
[Graphical view]
PANTHERiPTHR11730. PTHR11730. 1 hit.
PfamiPF00909. Ammonium_transp. 1 hit.
[Graphical view]
PRINTSiPR00342. RHESUSRHD.
SUPFAMiSSF111352. SSF111352. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiQ22947_CAEEL
AccessioniPrimary (citable) accession number: Q22947
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: May 11, 2016
This is version 109 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.