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Protein
Submitted name:

Paralysed Arrest at Two-fold

Gene

pat-9

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

SignaLinkiQ22829.

Names & Taxonomyi

Protein namesi
Submitted name:
Paralysed Arrest at Two-foldImported
Gene namesi
Name:pat-9Imported
ORF Names:CELE_T27B1.2Imported, T27B1.2Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome X

Organism-specific databases

WormBaseiT27B1.2; CE38558; WBGene00003933; pat-9.

Subcellular locationi

GO - Cellular componenti

  • nucleus Source: WormBase
Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiQ22829.
PeptideAtlasiQ22829.

Expressioni

Gene expression databases

BgeeiWBGene00003933.

Interactioni

Protein-protein interaction databases

IntActiQ22829. 2 interactors.
STRINGi6239.T27B1.2.2.

Structurei

3D structure databases

ProteinModelPortaliQ22829.
SMRiQ22829.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini84 – 111C2H2-typeInterPro annotationAdd BLAST28
Domaini112 – 139C2H2-typeInterPro annotationAdd BLAST28
Domaini140 – 167C2H2-typeInterPro annotationAdd BLAST28

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
GeneTreeiENSGT00860000134045.
HOGENOMiHOG000020799.
InParanoidiQ22829.
OMAiCNARFNR.
OrthoDBiEOG091G0A7J.

Family and domain databases

Gene3Di3.30.160.60. 3 hits.
InterProiIPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 3 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 3 hits.
PS50157. ZINC_FINGER_C2H2_2. 3 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q22829-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MENRTPMQHH SGYEIVKSEP PSTPKTLIKS SYMENTPEMV FGSFPIHSGF
60 70 80 90 100
CTQVVTHTDP MNNNNQPKTN ANGRALAADR KRPYPCNLCS SKFGSKMELE
110 120 130 140 150
EHQNSHTGQK PFECDTCNAR FNRRSTLWNH KRIHSDAKPF VCTVCQMTFK
160 170 180 190 200
WKNSLKCHKD MHQRKNETSA HLDNDLRQLT YATAAKRKLQ MEQEENGGLP
210 220 230 240 250
ASSSASSVIS HPLITTTSGN KKRSKAAKAK QTPSSLATTL SQVHLGAVQP
260 270 280 290 300
LHASALVPPS DHQIDLDTTS LDSLMQSQNQ NFLMQLYGYS DDGRHNGGML
310 320 330 340 350
SLDDTMLSNL SDSKSDSGSS SGGLSIQLPM QTINMLNFRN LGTQQLPPVH
360 370 380 390 400
QLASSLPSVS SGMDYVNVNQ HDSHYIVSQP DMMLGNQPLY HNGSFANIEK
410 420 430 440 450
SNPHNNQFTI DSCVLLPSSR QDYPFDYTMV NQQYPMQEQV HDQTVGVSVV
460 470
QQHYAEQAHA HGKTVPHEQW
Length:470
Mass (Da):52,437
Last modified:June 7, 2005 - v2
Checksum:iF1411E91D48DE61D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284606 Genomic DNA. Translation: CCD72790.1.
PIRiT34392.
RefSeqiNP_510680.2. NM_078279.3.
UniGeneiCel.252.

Genome annotation databases

EnsemblMetazoaiT27B1.2; T27B1.2; WBGene00003933.
GeneIDi181714.
KEGGicel:CELE_T27B1.2.
UCSCiT27B1.2.1. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284606 Genomic DNA. Translation: CCD72790.1.
PIRiT34392.
RefSeqiNP_510680.2. NM_078279.3.
UniGeneiCel.252.

3D structure databases

ProteinModelPortaliQ22829.
SMRiQ22829.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ22829. 2 interactors.
STRINGi6239.T27B1.2.2.

Proteomic databases

PaxDbiQ22829.
PeptideAtlasiQ22829.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiT27B1.2; T27B1.2; WBGene00003933.
GeneIDi181714.
KEGGicel:CELE_T27B1.2.
UCSCiT27B1.2.1. c. elegans.

Organism-specific databases

CTDi181714.
WormBaseiT27B1.2; CE38558; WBGene00003933; pat-9.

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
GeneTreeiENSGT00860000134045.
HOGENOMiHOG000020799.
InParanoidiQ22829.
OMAiCNARFNR.
OrthoDBiEOG091G0A7J.

Enzyme and pathway databases

SignaLinkiQ22829.

Gene expression databases

BgeeiWBGene00003933.

Family and domain databases

Gene3Di3.30.160.60. 3 hits.
InterProiIPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 3 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 3 hits.
PS50157. ZINC_FINGER_C2H2_2. 3 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ22829_CAEEL
AccessioniPrimary (citable) accession number: Q22829
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: June 7, 2005
Last modified: November 30, 2016
This is version 131 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.