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Protein
Submitted name:

Paralysed Arrest at Two-fold

Gene

pat-9

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

  • regulation of striated muscle cell differentiation Source: WormBase

Keywordsi

LigandMetal-binding, Zinc

Enzyme and pathway databases

SignaLinkiQ22829

Names & Taxonomyi

Protein namesi
Submitted name:
Paralysed Arrest at Two-foldImported
Gene namesi
Name:pat-9Imported
ORF Names:CELE_T27B1.2Imported, T27B1.2Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome X

Organism-specific databases

WormBaseiT27B1.2 ; CE38558 ; WBGene00003933 ; pat-9

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

EPDiQ22829
PaxDbiQ22829
PeptideAtlasiQ22829

Expressioni

Gene expression databases

BgeeiWBGene00003933

Interactioni

Protein-protein interaction databases

IntActiQ22829, 2 interactors
STRINGi6239.T27B1.2.2

Structurei

3D structure databases

ProteinModelPortaliQ22829
SMRiQ22829
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini84 – 111C2H2-typeInterPro annotationAdd BLAST28
Domaini112 – 139C2H2-typeInterPro annotationAdd BLAST28
Domaini140 – 167C2H2-typeInterPro annotationAdd BLAST28

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00910000144773
HOGENOMiHOG000020799
InParanoidiQ22829
OMAiCNARFNR
OrthoDBiEOG091G0A7J

Family and domain databases

InterProiView protein in InterPro
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 3 hits
SUPFAMiSSF57667 SSF57667, 2 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 3 hits
PS50157 ZINC_FINGER_C2H2_2, 3 hits

Sequencei

Sequence statusi: Complete.

Q22829-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MENRTPMQHH SGYEIVKSEP PSTPKTLIKS SYMENTPEMV FGSFPIHSGF
60 70 80 90 100
CTQVVTHTDP MNNNNQPKTN ANGRALAADR KRPYPCNLCS SKFGSKMELE
110 120 130 140 150
EHQNSHTGQK PFECDTCNAR FNRRSTLWNH KRIHSDAKPF VCTVCQMTFK
160 170 180 190 200
WKNSLKCHKD MHQRKNETSA HLDNDLRQLT YATAAKRKLQ MEQEENGGLP
210 220 230 240 250
ASSSASSVIS HPLITTTSGN KKRSKAAKAK QTPSSLATTL SQVHLGAVQP
260 270 280 290 300
LHASALVPPS DHQIDLDTTS LDSLMQSQNQ NFLMQLYGYS DDGRHNGGML
310 320 330 340 350
SLDDTMLSNL SDSKSDSGSS SGGLSIQLPM QTINMLNFRN LGTQQLPPVH
360 370 380 390 400
QLASSLPSVS SGMDYVNVNQ HDSHYIVSQP DMMLGNQPLY HNGSFANIEK
410 420 430 440 450
SNPHNNQFTI DSCVLLPSSR QDYPFDYTMV NQQYPMQEQV HDQTVGVSVV
460 470
QQHYAEQAHA HGKTVPHEQW
Length:470
Mass (Da):52,437
Last modified:June 7, 2005 - v2
Checksum:iF1411E91D48DE61D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284606 Genomic DNA Translation: CCD72790.1
PIRiT34392
RefSeqiNP_510680.2, NM_078279.3
UniGeneiCel.252

Genome annotation databases

EnsemblMetazoaiT27B1.2; T27B1.2; WBGene00003933
GeneIDi181714
KEGGicel:CELE_T27B1.2
UCSCiT27B1.2.1 c. elegans

Similar proteinsi

Entry informationi

Entry nameiQ22829_CAEEL
AccessioniPrimary (citable) accession number: Q22829
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: June 7, 2005
Last modified: February 28, 2018
This is version 139 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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