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Protein
Submitted name:

SP (Specificity Protein) Transcription Factor

Gene

sptf-2

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Keywordsi

LigandMetal-binding, Zinc

Enzyme and pathway databases

ReactomeiR-CEL-2173796. SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription.
R-CEL-3232118. SUMOylation of transcription factors.
R-CEL-6807505. RNA polymerase II transcribes snRNA genes.

Names & Taxonomyi

Protein namesi
Submitted name:
SP (Specificity Protein) Transcription FactorImported
Gene namesi
Name:sptf-2Imported
ORF Names:CELE_T22C8.5Imported, T22C8.5Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome II

Organism-specific databases

WormBaseiT22C8.5; CE02353; WBGene00011926; sptf-2.

PTM / Processingi

Proteomic databases

PaxDbiQ22678.

Expressioni

Gene expression databases

BgeeiWBGene00011926.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
unc-37O024825EBI-2420648,EBI-314716

Protein-protein interaction databases

IntActiQ22678. 4 interactors.
STRINGi6239.T22C8.5.

Structurei

3D structure databases

ProteinModelPortaliQ22678.
SMRiQ22678.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini77 – 106C2H2-typeInterPro annotationAdd BLAST30
Domaini107 – 136C2H2-typeInterPro annotationAdd BLAST30
Domaini137 – 160C2H2-typeInterPro annotationAdd BLAST24

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
GeneTreeiENSGT00760000118984.
InParanoidiQ22678.
KOiK09200.
OMAiPKAFPLQ.
OrthoDBiEOG091G0UIA.
PhylomeDBiQ22678.

Family and domain databases

InterProiView protein in InterPro
IPR036236. Znf_C2H2_sf.
IPR013087. Znf_C2H2_type.
SMARTiView protein in SMART
SM00355. ZnF_C2H2. 3 hits.
SUPFAMiSSF57667. SSF57667. 2 hits.
PROSITEiView protein in PROSITE
PS00028. ZINC_FINGER_C2H2_1. 3 hits.
PS50157. ZINC_FINGER_C2H2_2. 3 hits.

Sequencei

Sequence statusi: Complete.

Q22678-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDGAATKFFR PWESHGSYHH SLPSISPPDS PASTSASSSS SSIGANELTT
60 70 80 90 100
KRRKCERCTC PNCKAIKHGD RGSQHTHLCS VPGCGKTYKK TSHLRAHLRK
110 120 130 140 150
HTGDRPFVCD WFDCGKRFDR SDQLIRHKRT HTKEYRFACK FCIRQFSRSD
160
HLQQHLTSVH NIVVVD
Length:166
Mass (Da):18,879
Last modified:November 1, 1996 - v1
Checksum:iABB1BAA42C4D2216
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284602 Genomic DNA. Translation: CAA88877.1.
PIRiT25118.
RefSeqiNP_495833.1. NM_063432.1.
UniGeneiCel.34005.

Genome annotation databases

EnsemblMetazoaiT22C8.5; T22C8.5; WBGene00011926.
GeneIDi188733.
KEGGicel:CELE_T22C8.5.
UCSCiT22C8.5. c. elegans.

Similar proteinsi

Entry informationi

Entry nameiQ22678_CAEEL
AccessioniPrimary (citable) accession number: Q22678
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: October 25, 2017
This is version 137 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported