Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

SP (Specificity Protein) Transcription Factor

Gene

sptf-2

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

ReactomeiR-CEL-2426168. Activation of gene expression by SREBF (SREBP).
R-CEL-3232118. SUMOylation of transcription factors.

Names & Taxonomyi

Protein namesi
Submitted name:
SP (Specificity Protein) Transcription FactorImported
Gene namesi
Name:sptf-2Imported
ORF Names:CELE_T22C8.5Imported, T22C8.5Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome II

Organism-specific databases

WormBaseiT22C8.5; CE02353; WBGene00011926; sptf-2.

PTM / Processingi

Proteomic databases

PaxDbiQ22678.
PRIDEiQ22678.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
unc-37O024825EBI-2420648,EBI-314716

Protein-protein interaction databases

IntActiQ22678. 4 interactions.
STRINGi6239.T22C8.5.

Structurei

3D structure databases

ProteinModelPortaliQ22678.
SMRiQ22678. Positions 70-156.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini77 – 10630C2H2-typeInterPro annotationAdd
BLAST
Domaini107 – 13630C2H2-typeInterPro annotationAdd
BLAST
Domaini137 – 16024C2H2-typeInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
GeneTreeiENSGT00760000118984.
InParanoidiQ22678.
KOiK09200.
OMAiTHTKEYR.
OrthoDBiEOG79SF2R.
PhylomeDBiQ22678.

Family and domain databases

Gene3Di3.30.160.60. 3 hits.
InterProiIPR030450. Sp1_fam.
IPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
PANTHERiPTHR23235. PTHR23235. 1 hit.
PfamiPF00096. zf-C2H2. 1 hit.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 3 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 3 hits.
PS50157. ZINC_FINGER_C2H2_2. 3 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q22678-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDGAATKFFR PWESHGSYHH SLPSISPPDS PASTSASSSS SSIGANELTT
60 70 80 90 100
KRRKCERCTC PNCKAIKHGD RGSQHTHLCS VPGCGKTYKK TSHLRAHLRK
110 120 130 140 150
HTGDRPFVCD WFDCGKRFDR SDQLIRHKRT HTKEYRFACK FCIRQFSRSD
160
HLQQHLTSVH NIVVVD
Length:166
Mass (Da):18,879
Last modified:November 1, 1996 - v1
Checksum:iABB1BAA42C4D2216
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284602 Genomic DNA. Translation: CAA88877.1.
PIRiT25118.
RefSeqiNP_495833.1. NM_063432.1.
UniGeneiCel.34005.

Genome annotation databases

EnsemblMetazoaiT22C8.5; T22C8.5; WBGene00011926.
GeneIDi188733.
KEGGicel:CELE_T22C8.5.
UCSCiT22C8.5. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284602 Genomic DNA. Translation: CAA88877.1.
PIRiT25118.
RefSeqiNP_495833.1. NM_063432.1.
UniGeneiCel.34005.

3D structure databases

ProteinModelPortaliQ22678.
SMRiQ22678. Positions 70-156.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ22678. 4 interactions.
STRINGi6239.T22C8.5.

Proteomic databases

PaxDbiQ22678.
PRIDEiQ22678.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiT22C8.5; T22C8.5; WBGene00011926.
GeneIDi188733.
KEGGicel:CELE_T22C8.5.
UCSCiT22C8.5. c. elegans.

Organism-specific databases

CTDi188733.
WormBaseiT22C8.5; CE02353; WBGene00011926; sptf-2.

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
GeneTreeiENSGT00760000118984.
InParanoidiQ22678.
KOiK09200.
OMAiTHTKEYR.
OrthoDBiEOG79SF2R.
PhylomeDBiQ22678.

Enzyme and pathway databases

ReactomeiR-CEL-2426168. Activation of gene expression by SREBF (SREBP).
R-CEL-3232118. SUMOylation of transcription factors.

Miscellaneous databases

NextBioi939894.

Family and domain databases

Gene3Di3.30.160.60. 3 hits.
InterProiIPR030450. Sp1_fam.
IPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
PANTHERiPTHR23235. PTHR23235. 1 hit.
PfamiPF00096. zf-C2H2. 1 hit.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 3 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 3 hits.
PS50157. ZINC_FINGER_C2H2_2. 3 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiQ22678_CAEEL
AccessioniPrimary (citable) accession number: Q22678
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: March 16, 2016
This is version 125 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.