Unreviewed,
UniProtKB/TrEMBL Q22675 (Q22675_CAEEL)
Last modified
June 16, 2009.
Version 67.
History...
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Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information
Names and origin
| Protein names | Submitted name: Protein T22C8.2, confirmed by transcript evidence EMBL CAA88874.1 Submitted name: Chondroitin hydrolase EMBL BAG48551.1 | ||||||
| Gene names |
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| Organism | Caenorhabditis elegans [Complete proteome] | ||||||
| Taxonomic identifier | 6239 [NCBI] | ||||||
| Taxonomic lineage | Eukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis |
Protein attributes
| Sequence length | 458 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at transcript level. |
Ontologies
| Keywords | |
|---|---|
| Domain | EGF-like domain RuleBase RU003701V0 |
| Molecular function | Hydrolase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro |
| Molecular function | hyalurononglucosaminidase activity Inferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Genome sequence of the nematode C. elegans: a platform for investigating biology." The C. elegans sequencing consortium Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bristol N2. |
| [2] | "Identification of a Novel Chondroitin Hydrolase in Caenorhabditis elegans." Kaneiwa T., Yamada S., Mizumoto S., Montano A.M., Mitani S., Sugahara K. J. Biol. Chem. 283:14971-14979(2008) [PubMed: 18390555] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. |
Cross-references
Sequence databases | |
|---|---|
| AB361565 mRNA. Translation: BAG48551.1. Z49071 Genomic DNA. Translation: CAA88874.1. | |
| PIR | T25115. |
| RefSeq | NP_495830.1. |
| UniGene | Cel.14321 |
3D structure databases | |
| HSSP | HSSP built from PDB template 1FCQ based on UniProtKB Q08169. |
| ModBase | Search... |
Protein family/group databases | |
| CAZy | GH56. Glycoside Hydrolase Family 56. |
Genome annotation databases | |
| Ensembl | T22C8.2. Caenorhabditis elegans. [Contig view] |
| GeneID | 174383. |
| KEGG | cel:T22C8.2. |
| NMPDR | fig|6239.3.peg.6667. |
Organism-specific databases | |
| WormBase | WBGene00011923. T22C8.2. |
| WormPep | T22C8.2. CE02350. [WorfDB] |
Phylogenomic databases | |
| OMA | Q22675. ITIFYAE. |
Gene expression databases | |
| ArrayExpress | Q22675. |
Family and domain databases | |
| InterPro | IPR013785. Aldolase_TIM. IPR006210. EGF-like. IPR013032. EGF-like_reg_CS. IPR000742. EGF_3. IPR017430. Glyco_hydro_56_Hyaluronidase. IPR001968. Glycoside_hydrolase_family_56. IPR018155. Hyaluronidase. [Graphical view] |
| Gene3D | G3DSA:3.20.20.70. Aldolase_TIM. 1 hit. |
| PANTHER | PTHR11769. Glyco_hydro_56. 1 hit. |
| Pfam | PF01630. Glyco_hydro_56. 1 hit. [Graphical view] |
| PIRSF | PIRSF038193. Hyaluronidase. 1 hit. |
| PRINTS | PR00846. GLHYDRLASE56. |
| ProDom | PD003549. Glyco_hydro_56. 1 hit. [Graphical view] [Entries sharing at least one domain] |
| SMART | SM00181. EGF. 1 hit. [Graphical view] |
| PROSITE | PS00022. EGF_1. 1 hit. PS01186. EGF_2. 1 hit. PS50026. EGF_3. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other Resources | |
| NextBio | 883802. |
Entry information
| Entry name | Q22675_CAEEL | ||||||||
| Accession | Primary (citable) accession number: Q22675 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

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