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Protein
Submitted name:

Uncharacterized protein

Gene

CELE_T21B6.3

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:CELE_T21B6.3Imported, T21B6.3Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome X

Organism-specific databases

WormBaseiT21B6.3; CE31621; WBGene00011880.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1919Sequence analysisAdd
BLAST
Chaini20 – 821802Sequence analysisPRO_5004201132Add
BLAST

Proteomic databases

EPDiQ22631.
PaxDbiQ22631.
PRIDEiQ22631.

Interactioni

Protein-protein interaction databases

DIPiDIP-24494N.
IntActiQ22631. 15 interactions.
MINTiMINT-114718.
STRINGi6239.T21B6.3.

Structurei

3D structure databases

ProteinModelPortaliQ22631.
SMRiQ22631. Positions 456-809.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini33 – 11583AppleInterPro annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili220 – 25637Sequence analysisAdd
BLAST
Coiled coili288 – 31326Sequence analysisAdd
BLAST

Keywords - Domaini

Coiled coilSequence analysis, SignalSequence analysis

Phylogenomic databases

eggNOGiENOG410J1PA. Eukaryota.
ENOG410YJXG. LUCA.
GeneTreeiENSGT00840000129679.
HOGENOMiHOG000021130.
InParanoidiQ22631.
OMAiSEWCEWS.
OrthoDBiEOG7D59MZ.

Family and domain databases

InterProiIPR003609. Pan_app.
IPR000884. TSP1_rpt.
[Graphical view]
PfamiPF00090. TSP_1. 7 hits.
[Graphical view]
SMARTiSM00473. PAN_AP. 1 hit.
SM00209. TSP1. 8 hits.
[Graphical view]
SUPFAMiSSF82895. SSF82895. 7 hits.
PROSITEiPS50092. TSP1. 7 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q22631-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQATVGLFAL AVLFCLADAG RISVSRGKNV TKIDDLCARM HNNTALEGSS
60 70 80 90 100
PLLMMQATAY ECQKKCVDIF PECSAVVYYY LHNETKKHFC YLFSDNSVQD
110 120 130 140 150
KIDLVEQKPE NKKDIVRMLE LVVDCHQFDA HPPLEEDGLA SSTDKVDRKK
160 170 180 190 200
RQQGDEAVEG VGDWTDWSHC SSNGHEVRSQ ACEYGRKIQR RGCPARSAPQ
210 220 230 240 250
RVPAPPAQQY APRAPEYPSA QQQQQQREQQ QREQQHREHQ ARLQQHQQQQ
260 270 280 290 300
QQQQQQQQQR PPQPQPQPQP QPPQRPPQQP QSFSGTHELH LQRQREQQQQ
310 320 330 340 350
QQQQQQQQQQ RQQNPQQQPQ QTTQFGQSQI QLQSGPVPPQ QHPQQQQPQQ
360 370 380 390 400
QPELERSPLD QHAQLYQQRM SQYRENFNQR HPARPKADPC PGGFCAPVPQ
410 420 430 440 450
APQQERPTPP PVLAPVINTA TQPPLPQPYP TRYRPAPPPP PACDGQGCVN
460 470 480 490 500
PPVVSGVWHD WSDWSTCSCT CGDGAKSRRR ECSTNNCQGA DYETEPCNLG
510 520 530 540 550
PCQTWSEWCE WSTCSASCGS GQRERTRFCH LGTNRCEGKD YESEQCSAGP
560 570 580 590 600
CPEWSQWEDW GQCSVTCGQG VAVRQRTCLG GVFGDHLCQG PKTEQRACDG
610 620 630 640 650
GPCSLWSPWQ EWSTCSASCG SGMKRRQRVC QFGTDCQGPN EESQFCYGPP
660 670 680 690 700
CAEWTEWCEW SGCSSKCGPG QRTRTRGCLG PNGQEATTCQ GPSIETTLCE
710 720 730 740 750
GQSCCNWSEW CHWSMCDKEC GGGQSIRTRT CLNSAGSPDS SCHCDGPDRE
760 770 780 790 800
EKECNSQSCA PQCAWNTWCE WSPCSTQLAC EVGVQSRSRQ CVGESGCHCI
810 820
GLAEESQQCR GLTQCPPKPP C
Length:821
Mass (Da):92,125
Last modified:October 1, 2002 - v2
Checksum:i61B82584DC50D2A9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284606 Genomic DNA. Translation: CAA92014.2.
PIRiT25061.
RefSeqiNP_509829.2. NM_077428.4.
UniGeneiCel.17838.

Genome annotation databases

EnsemblMetazoaiT21B6.3; T21B6.3; WBGene00011880.
GeneIDi181284.
KEGGicel:CELE_T21B6.3.
UCSCiT21B6.3. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284606 Genomic DNA. Translation: CAA92014.2.
PIRiT25061.
RefSeqiNP_509829.2. NM_077428.4.
UniGeneiCel.17838.

3D structure databases

ProteinModelPortaliQ22631.
SMRiQ22631. Positions 456-809.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-24494N.
IntActiQ22631. 15 interactions.
MINTiMINT-114718.
STRINGi6239.T21B6.3.

Proteomic databases

EPDiQ22631.
PaxDbiQ22631.
PRIDEiQ22631.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiT21B6.3; T21B6.3; WBGene00011880.
GeneIDi181284.
KEGGicel:CELE_T21B6.3.
UCSCiT21B6.3. c. elegans.

Organism-specific databases

CTDi181284.
WormBaseiT21B6.3; CE31621; WBGene00011880.

Phylogenomic databases

eggNOGiENOG410J1PA. Eukaryota.
ENOG410YJXG. LUCA.
GeneTreeiENSGT00840000129679.
HOGENOMiHOG000021130.
InParanoidiQ22631.
OMAiSEWCEWS.
OrthoDBiEOG7D59MZ.

Miscellaneous databases

NextBioi913276.

Family and domain databases

InterProiIPR003609. Pan_app.
IPR000884. TSP1_rpt.
[Graphical view]
PfamiPF00090. TSP_1. 7 hits.
[Graphical view]
SMARTiSM00473. PAN_AP. 1 hit.
SM00209. TSP1. 8 hits.
[Graphical view]
SUPFAMiSSF82895. SSF82895. 7 hits.
PROSITEiPS50092. TSP1. 7 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiQ22631_CAEEL
AccessioniPrimary (citable) accession number: Q22631
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: October 1, 2002
Last modified: May 11, 2016
This is version 118 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.