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Protein
Submitted name:

Prolyl Amino-acyl tRNA Synthetase

Gene

pars-1

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Aminoacyl-tRNA synthetaseImported, Ligase

Names & Taxonomyi

Protein namesi
Submitted name:
Prolyl Amino-acyl tRNA SynthetaseImported
Gene namesi
Name:pars-1Imported
ORF Names:CELE_T20H4.3Imported, T20H4.3Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome III

Organism-specific databases

WormBaseiT20H4.3a; CE00748; WBGene00004189; pars-1.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

EPDiQ22620.
PaxDbiQ22620.
PRIDEiQ22620.

Expressioni

Gene expression databases

ExpressionAtlasiQ22620. baseline.

Interactioni

Protein-protein interaction databases

DIPiDIP-27500N.
IntActiQ22620. 1 interaction.
MINTiMINT-1088677.
STRINGi6239.T20H4.3a.1.

Structurei

3D structure databases

ProteinModelPortaliQ22620.
SMRiQ22620. Positions 90-581.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini3 – 6058WHEP-TRSInterPro annotationAdd
BLAST
Domaini120 – 371252AA_TRNA_LIGASE_IIInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG410IR8R. Eukaryota.
COG0442. LUCA.
GeneTreeiENSGT00550000074815.
HOGENOMiHOG000167538.
InParanoidiQ22620.
KOiK01881.
OMAiIPHCLVP.
PhylomeDBiQ22620.

Family and domain databases

Gene3Di1.10.287.10. 1 hit.
3.30.110.30. 1 hit.
3.40.50.800. 1 hit.
HAMAPiMF_01571. Pro_tRNA_synth_type3.
InterProiIPR002314. aa-tRNA-synt_IIb.
IPR006195. aa-tRNA-synth_II.
IPR004154. Anticodon-bd.
IPR002316. Pro-tRNA-ligase_IIa.
IPR004499. Pro-tRNA-ligase_IIa_arc-type.
IPR016061. Pro-tRNA_ligase_II_C.
IPR017449. Pro-tRNA_synth_II.
IPR009068. S15_NS1_RNA-bd.
IPR000738. WHEP-TRS_dom.
[Graphical view]
PfamiPF03129. HGTP_anticodon. 1 hit.
PF09180. ProRS-C_1. 1 hit.
PF00587. tRNA-synt_2b. 1 hit.
PF00458. WHEP-TRS. 1 hit.
[Graphical view]
PRINTSiPR01046. TRNASYNTHPRO.
SMARTiSM00946. ProRS-C_1. 1 hit.
SM00991. WHEP-TRS. 1 hit.
[Graphical view]
SUPFAMiSSF47060. SSF47060. 1 hit.
SSF52954. SSF52954. 1 hit.
SSF64586. SSF64586. 1 hit.
TIGRFAMsiTIGR00408. proS_fam_I. 1 hit.
PROSITEiPS50862. AA_TRNA_LIGASE_II. 1 hit.
PS51185. WHEP_TRS_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q22620-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSTKEEITKE IEEQGAEVRR VKGDKNSTEE AKKEAIDKLL ALKLTYKEVT
60 70 80 90 100
GQEYAAPNAR QSKPKKEEKP KQQPKQQEKK QDGKKQTLLG VGTKKDDNYS
110 120 130 140 150
EWYSEVITKA EMIEYYDVSG CYVLRPWSFA VWESIQEWFD SGIKKLGVKN
160 170 180 190 200
CYFPMFVSNA ALEREKTHIA DFAPEVAWVT RAGNSEMAEP IAIRPTSETV
210 220 230 240 250
MYPSYKKWVQ SHRDLPIKLN QWCNVVRWEF KHPTPFLRTR EFLWQEGHTA
260 270 280 290 300
FANPADAEKE VFQILDLYAG VYTDLLAIPV VKGRKSEKEK FAGGDFTTTV
310 320 330 340 350
EAYVACNGRG IQGATSHHLG QNFSKMFDIS YEDPAKEGER AFAWQNSWGL
360 370 380 390 400
STRTIGAMVM IHGDDKGLVL PPRVAAVQVI VVPVGFKTEN KQSLFDAVDK
410 420 430 440 450
VTKDLVADGV KAEHDLRENY NAGWKFNHWE LKGVPIRFEV GPNDLAKNQV
460 470 480 490 500
TAVIRHNGEK KQLSLEGLSK TVKSLLDEIH TAMYNKVLAQ RDSHLKSTTC
510 520 530 540 550
IEEFKKLLDE KCIILSPFCG RPDCEEEIKK ASTREDGEGA QMGAKTLCIP
560 570 580
LDQPKQELPS KCLFPSCTYN AKAFALFGRS Y
Length:581
Mass (Da):65,819
Last modified:November 1, 1996 - v1
Checksum:i7B30D42FF83C05EF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284603 Genomic DNA. Translation: CCD73349.1.
PIRiT16915.
RefSeqiNP_001022777.1. NM_001027606.3.
UniGeneiCel.7671.

Genome annotation databases

EnsemblMetazoaiT20H4.3a; T20H4.3a; WBGene00004189.
GeneIDi176024.
KEGGicel:CELE_T20H4.3.
UCSCiT20H4.3b. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284603 Genomic DNA. Translation: CCD73349.1.
PIRiT16915.
RefSeqiNP_001022777.1. NM_001027606.3.
UniGeneiCel.7671.

3D structure databases

ProteinModelPortaliQ22620.
SMRiQ22620. Positions 90-581.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-27500N.
IntActiQ22620. 1 interaction.
MINTiMINT-1088677.
STRINGi6239.T20H4.3a.1.

Proteomic databases

EPDiQ22620.
PaxDbiQ22620.
PRIDEiQ22620.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiT20H4.3a; T20H4.3a; WBGene00004189.
GeneIDi176024.
KEGGicel:CELE_T20H4.3.
UCSCiT20H4.3b. c. elegans.

Organism-specific databases

CTDi176024.
WormBaseiT20H4.3a; CE00748; WBGene00004189; pars-1.

Phylogenomic databases

eggNOGiENOG410IR8R. Eukaryota.
COG0442. LUCA.
GeneTreeiENSGT00550000074815.
HOGENOMiHOG000167538.
InParanoidiQ22620.
KOiK01881.
OMAiIPHCLVP.
PhylomeDBiQ22620.

Gene expression databases

ExpressionAtlasiQ22620. baseline.

Family and domain databases

Gene3Di1.10.287.10. 1 hit.
3.30.110.30. 1 hit.
3.40.50.800. 1 hit.
HAMAPiMF_01571. Pro_tRNA_synth_type3.
InterProiIPR002314. aa-tRNA-synt_IIb.
IPR006195. aa-tRNA-synth_II.
IPR004154. Anticodon-bd.
IPR002316. Pro-tRNA-ligase_IIa.
IPR004499. Pro-tRNA-ligase_IIa_arc-type.
IPR016061. Pro-tRNA_ligase_II_C.
IPR017449. Pro-tRNA_synth_II.
IPR009068. S15_NS1_RNA-bd.
IPR000738. WHEP-TRS_dom.
[Graphical view]
PfamiPF03129. HGTP_anticodon. 1 hit.
PF09180. ProRS-C_1. 1 hit.
PF00587. tRNA-synt_2b. 1 hit.
PF00458. WHEP-TRS. 1 hit.
[Graphical view]
PRINTSiPR01046. TRNASYNTHPRO.
SMARTiSM00946. ProRS-C_1. 1 hit.
SM00991. WHEP-TRS. 1 hit.
[Graphical view]
SUPFAMiSSF47060. SSF47060. 1 hit.
SSF52954. SSF52954. 1 hit.
SSF64586. SSF64586. 1 hit.
TIGRFAMsiTIGR00408. proS_fam_I. 1 hit.
PROSITEiPS50862. AA_TRNA_LIGASE_II. 1 hit.
PS51185. WHEP_TRS_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiQ22620_CAEEL
AccessioniPrimary (citable) accession number: Q22620
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: July 6, 2016
This is version 132 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.