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Q22601 (Q22601_CAEEL) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 92. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Protein APA-2 EMBL CCD68583.1
Gene names
Name:apa-2 EMBL CCD68583.1 WormBase T20B5.1
ORF Names:CELE_T20B5.1 EMBL CCD68583.1
OrganismCaenorhabditis elegans [Reference proteome] EMBL CCD68583.1
Taxonomic identifier6239 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Ecdysozoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length925 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Binary interactions

With

Entry

#Exp.

IntAct

Notes

rme-6Q9GYH73EBI-5323248,EBI-320814

Sequences

Sequence LengthMass (Da)Tools
Q22601 [UniParc].

Last modified October 1, 2001. Version 2.
Checksum: A816ADC042FD557C

FASTA925104,180
        10         20         30         40         50         60 
MPAVKGDGMR GLAVFISDIR NCKSKEAELK RINKELANIR SKFKGDKTLD GYQKKKYVCK 

        70         80         90        100        110        120 
LLFIFLLGND IDFGHMEAVN LLSSNKYTEK QIGYLFISVL IEQQSDLMKL IVQGIRNDLT 

       130        140        150        160        170        180 
SRNPVHVNLA LQCISNMGSR EMVEAFCTDL PKLLVSGETI DFVKQSAALC ILKLFRNSPD 

       190        200        210        220        230        240 
SFQPGDYASR IVHLLNDSHM GVVTSAASLI EALSKKWPEE YKGAVPLAIS RLSRIVTATY 

       250        260        270        280        290        300 
TDLQDYTYYF VPAPWLCVKL LRLLQNYPPP DDPSNKARLL ECLEGILNKA QDAPKSKKVQ 

       310        320        330        340        350        360 
HSNAKNAVLF EAIALIIHMD SEPQLLVRAC NQLGTFLSHR ETNLRYLALE SMCLLATSEF 

       370        380        390        400        410        420 
SHDAVKKHQD TIINSLKTER DVSVRQRAVD LLYAMCDRSN ANQIVAEMLA YLETADYSIR 

       430        440        450        460        470        480 
EEMVLKVAIL AEKYATDYTW YVDVILKLIR IAGDYVSEEV WYRVIQIVVN REDVQGYAAK 

       490        500        510        520        530        540 
TVFEALQRPA CHENMVKVGG YILGEFGNFI AGDERSTAKI QFELLHSKFH LCSITTRCLL 

       550        560        570        580        590        600 
LTTYIKFCNL FPEIKPLVQQ VFQTDHNLRN PDAELQQRSI EYLQMTKLAS NDVLATILEV 

       610        620        630        640        650        660 
MPAFAEKESS LLAKLKKSKP QLEEIEREEK EKRSKPTAVM SEGSTSLVDF DSTNDTTASL 

       670        680        690        700        710        720 
ADVFANNSGT GLGAQGDEVE IANKDDYLKF VTKSNAILWE DDYIQIGCKL ETRNNLGRLG 

       730        740        750        760        770        780 
MFYGNKTSQP FNKFTPIITC PGALAVQLQA QAKPVEPVVA AGTQVQQLIN FVCVQEFQKM 

       790        800        810        820        830        840 
PIMNIKFTFT DRAGAVQNFD KNFYLPLFIS KFFEPTNMTS EQFFTRWKSL GAASQEAQKI 

       850        860        870        880        890        900 
FNALSPIEHA TIESRLKGFG ANLLTDVDPN PDNYVCAGII HTQTQQIGTL IRLEPNKQAK 

       910        920 
MYRLTIRSSK DTVVQTLVDL LGNQF

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References

[1]"Genome sequence of the nematode C. elegans: a platform for investigating biology."
Caenorhabditis elegans Sequencing Consortium
Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Bristol N2 EMBL CCD68583.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		FO081025 Genomic DNA. Translation: CCD68583.1.
PIRT16911.
RefSeqNP_509572.1. NM_077171.6.

3D structure databases

HSSPHSSP built from PDB template 1GW5 based on UniProtKB P17427.
ProteinModelPortalQ22601.
SMRQ22601. Positions 5-613, 682-925.
ModBaseSearch...

Protein-protein interaction databases

IntActQ22601. 1 interaction.
STRING6239.T20B5.1.1.
Q22601.

Proteomic databases

PaxDbQ22601.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaT20B5.1.1; T20B5.1.1; T20B5.1.
T20B5.1.2; T20B5.1.2; T20B5.1.
GeneID181163.
KEGGcel:CELE_T20B5.1.
UCSCT20B5.1.1. c. elegans.

Organism-specific databases

CTD181163.
WormBaseT20B5.1; CE28680; WBGene00000161; apa-2.

Phylogenomic databases

eggNOGNOG303101.
GeneTreeENSGT00550000074757.
HOGENOMHOG000170596.
InParanoidQ22601.
KOK11824.
OMAPNKQAQM.

Family and domain databases

Gene3D1.25.10.10. 1 hit.
2.60.40.1030. 1 hit.
3.30.310.30. 1 hit.
InterProIPR017104. AP2_complex_asu.
IPR011989. ARM-like.
IPR016024. ARM-type_fold.
IPR002553. Clathrin/coatomer_adapt-like_N.
IPR013038. Clathrin_a-adaptin_app_Ig-like.
IPR003164. Clathrin_a-adaptin_app_sub_C.
IPR008152. Clathrin_a/b/g-adaptin_app_Ig.
IPR015873. Clathrin_a/coatomer_app_sub_C.
IPR009028. Coatomer/calthrin_app_sub_C.
IPR013041. Coatomer/clathrin_app_Ig-like.
[Graphical view]
PfamPF01602. Adaptin_N. 1 hit.
PF02296. Alpha_adaptin_C. 1 hit.
PF02883. Alpha_adaptinC2. 1 hit.
[Graphical view]
PIRSFPIRSF037091. AP2_complex_alpha. 1 hit.
SMARTSM00809. Alpha_adaptinC2. 1 hit.
[Graphical view]
SUPFAMSSF55711. AP2_adap_app. 1 hit.
SSF48371. ARM-type_fold. 1 hit.
SSF49348. Clath_adapt. 1 hit.
ProtoNetSearch...

Other

NextBio912676.

Entry information

Entry nameQ22601_CAEEL
AccessionPrimary (citable) accession number: Q22601
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: October 1, 2001
Last modified: May 1, 2013
This is version 92 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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