Q223C2 (Q223C2_RHOFD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor EMBL ABD67881.1

Gene names

Ordered Locus Names:

Rfer_0120 EMBL ABD67881.1

Organism

Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) [Complete proteome] [HAMAP] EMBL ABD67881.1

Taxonomic identifier

338969 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Comamonadaceae › Albidiferax › Albidiferax ferrireducens

Protein attributes

Sequence length	519 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	chemotaxis Inferred from electronic annotation. Source: InterPro regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro
Cellular_component	membrane Inferred from electronic annotation. Source: InterPro
Molecular_function	signal transducer activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q223C2 [UniParc]. Last modified April 18, 2006. Version 1. Checksum: 332DBD03C4D10B4D	FASTA	519	55,575
	10 20 30 40 50 60 MRMNLPVTQR EFDYPAEHML VSTTDSKGFI THCNRAFVAV SGYTYDELIG QNHNLIRHPD 70 80 90 100 110 120 MPAAAFKDLW SSVGRGRPWT GMVKNRRADG DHYWVQANVT PIMENGKPRG YMSVRIKPSR 130 140 150 160 170 180 QEIKAAEGLY AQMNAAQESG KLPFHLQGGQ VHYKGVRGMA GRIRRMTLTS RLGLALGFMI 190 200 210 220 230 240 ALGMLPQWLD LQGMSGLGLK LGSLLAGAAL VLLWFHKNFD TAMGEAGRFA DDLAGCNLTT 250 260 270 280 290 300 SVATHFPPPL DSLIRSLRQI QANLQAVVGD VRGEIASFTR SAAEIAAGSL NLSARTESQA 310 320 330 340 350 360 SSLQQTAASM EEISSTVRQT ADTAAQVSAQ SAISTRVATR GGEAMHQVGL AMQAIESSST 370 380 390 400 410 420 EVREIVDVIE GIAFQTNILA LNAAVEAARA GEQGRGFAVV AAEVRALATR SAVAAKEIRT 430 440 450 460 470 480 LIAQSVDQIS QVTQQMTGAG DTIDEVVQSV RQVGELIQQI SNTTQEQSLG ISQVNEAVIQ 490 500 510 LDAVTQQNAA LVEESAASAN GLSDSAVTLA RSVQVFRLG

References

[1]

"Complete sequence of chromosome of Rhodoferax ferrireducens DSM 15236." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Kiss H., Schmutz J., Larimer F., Land M. , Kyrpides N., Ivanova N., Richardson P. Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 15236 / ATCC BAA-621 / T118.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000267 Genomic DNA. Translation: ABD67881.1.
RefSeq	YP_521412.1. NC_007908.1.
3D structure databases
ProteinModelPortal	Q223C2.
SMR	Q223C2. Positions 295-518.
ModBase	Search...
Protein-protein interaction databases
STRING	338969.Rfer_0120.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABD67881; ABD67881; Rfer_0120.
GeneID	3960219.
KEGG	rfr:Rfer_0120.
PATRIC	23232693. VBIRhoFer131161_0374.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2202.
HOGENOM	HOG000148074.
KO	K03776.
OMA	NDISHSS.
ProtClustDB	CLSK950947.
Enzyme and pathway databases
BioCyc	AFER338969:GHU9-179-MONOMER.
Family and domain databases
InterPro	IPR004090. Chemotax_Me-accpt_rcpt. IPR004089. MCPsignal_dom. IPR001610. PAC. IPR000014. PAS. [Graphical view]
Pfam	PF00015. MCPsignal. 1 hit. [Graphical view]
PRINTS	PR00260. CHEMTRNSDUCR.
SMART	SM00283. MA. 1 hit. SM00086. PAC. 1 hit. SM00091. PAS. 1 hit. [Graphical view]
TIGRFAMs	TIGR00229. sensory_box. 1 hit.
PROSITE	PS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit. PS50112. PAS. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q223C2_RHOFD

Accession

Primary (citable) accession number: Q223C2

Entry history

Integrated into UniProtKB/TrEMBL:	April 18, 2006
Last sequence update:	April 18, 2006
Last modified:	May 1, 2013
This is version 46 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)