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Q223C2 (Q223C2_RHOFD) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 50. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Rfer_0120 EMBL ABD67881.1
OrganismRhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) [Complete proteome] [HAMAP] EMBL ABD67881.1
Taxonomic identifier338969 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeAlbidiferax

Protein attributes

Sequence length519 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentmembrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q223C2 [UniParc].

Last modified April 18, 2006. Version 1.
Checksum: 332DBD03C4D10B4D

FASTA51955,575
        10         20         30         40         50         60 
MRMNLPVTQR EFDYPAEHML VSTTDSKGFI THCNRAFVAV SGYTYDELIG QNHNLIRHPD 

        70         80         90        100        110        120 
MPAAAFKDLW SSVGRGRPWT GMVKNRRADG DHYWVQANVT PIMENGKPRG YMSVRIKPSR 

       130        140        150        160        170        180 
QEIKAAEGLY AQMNAAQESG KLPFHLQGGQ VHYKGVRGMA GRIRRMTLTS RLGLALGFMI 

       190        200        210        220        230        240 
ALGMLPQWLD LQGMSGLGLK LGSLLAGAAL VLLWFHKNFD TAMGEAGRFA DDLAGCNLTT 

       250        260        270        280        290        300 
SVATHFPPPL DSLIRSLRQI QANLQAVVGD VRGEIASFTR SAAEIAAGSL NLSARTESQA 

       310        320        330        340        350        360 
SSLQQTAASM EEISSTVRQT ADTAAQVSAQ SAISTRVATR GGEAMHQVGL AMQAIESSST 

       370        380        390        400        410        420 
EVREIVDVIE GIAFQTNILA LNAAVEAARA GEQGRGFAVV AAEVRALATR SAVAAKEIRT 

       430        440        450        460        470        480 
LIAQSVDQIS QVTQQMTGAG DTIDEVVQSV RQVGELIQQI SNTTQEQSLG ISQVNEAVIQ 

       490        500        510 
LDAVTQQNAA LVEESAASAN GLSDSAVTLA RSVQVFRLG 

« Hide

References

[1]"Complete sequence of chromosome of Rhodoferax ferrireducens DSM 15236."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Kiss H., Schmutz J., Larimer F., Land M. expand/collapse author list , Kyrpides N., Ivanova N., Richardson P.
Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 15236 / ATCC BAA-621 / T118.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000267 Genomic DNA. Translation: ABD67881.1.
RefSeqYP_521412.1. NC_007908.1.

3D structure databases

ProteinModelPortalQ223C2.
SMRQ223C2. Positions 295-518.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING338969.Rfer_0120.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABD67881; ABD67881; Rfer_0120.
GeneID3960219.
KEGGrfr:Rfer_0120.
PATRIC23232693. VBIRhoFer131161_0374.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2202.
HOGENOMHOG000148074.
KOK03776.
OMAREWVDIA.
OrthoDBEOG6G4VQG.
ProtClustDBCLSK950947.

Enzyme and pathway databases

BioCycAFER338969:GHU9-120-MONOMER.

Family and domain databases

InterProIPR004090. Chemotax_Me-accpt_rcpt.
IPR004089. MCPsignal_dom.
IPR001610. PAC.
IPR000014. PAS.
[Graphical view]
PfamPF00015. MCPsignal. 1 hit.
PF13426. PAS_9. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00283. MA. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMSSF55785. SSF55785. 1 hit.
TIGRFAMsTIGR00229. sensory_box. 1 hit.
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ223C2_RHOFD
AccessionPrimary (citable) accession number: Q223C2
Entry history
Integrated into UniProtKB/TrEMBL: April 18, 2006
Last sequence update: April 18, 2006
Last modified: November 13, 2013
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)