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Protein
Submitted name:

SyNapTotagmin

Gene

snt-7

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
SyNapTotagminImported
Gene namesi
Name:snt-7Imported
ORF Names:CELE_T10B10.5Imported, T10B10.5Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome X

Organism-specific databases

WormBaseiT10B10.5; CE41018; WBGene00011682; snt-7.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei17 – 3721HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiQ22372.
PRIDEiQ22372.

Interactioni

Protein-protein interaction databases

STRINGi6239.T10B10.5.

Structurei

3D structure databases

ProteinModelPortaliQ22372.
SMRiQ22372. Positions 143-416.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini160 – 25798C2InterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 1 C2 domain.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG1028. Eukaryota.
ENOG410XRME. LUCA.
HOGENOMiHOG000018285.
InParanoidiQ22372.
OMAiRINEHFE.
OrthoDBiEOG7VX90S.
PhylomeDBiQ22372.

Family and domain databases

Gene3Di2.60.40.150. 2 hits.
InterProiIPR000008. C2_dom.
[Graphical view]
PfamiPF00168. C2. 1 hit.
[Graphical view]
SMARTiSM00239. C2. 2 hits.
[Graphical view]
SUPFAMiSSF49562. SSF49562. 2 hits.
PROSITEiPS50004. C2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q22372-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKIPDVLENL EITEQNFLIV LCATVVIVVL FVSFFLVKTK NKLNWYDQNV
60 70 80 90 100
LDMGQNPTHL RCTTIYRTNT DDATPNPESK LGESFPSTSS IPKGDLTSLF
110 120 130 140 150
MIPKAKKGAR SMFSNLHQNQ FDRGLYQFPT GDESACSSVT MSAVGSIQLS
160 170 180 190 200
VSHDVNLNLL TVTIVKAVDL PTKREDDLPN PFMKVSLEIP DSKKPNVDHQ
210 220 230 240 250
TKTYNGTASP LINEDFYFSV TSQQVSICRL EVMVYDYDQF SVDECVGYCW
260 270 280 290 300
LTLGRINEHF EHDLPTLFWA EVLPYEDGEN KGYGQVLFAL SYLSHAQRLT
310 320 330 340 350
MNIFKVRNVR FRNGGNVALR VTLLDGEEKP LKKKKTSLKK AARSVQFNEC
360 370 380 390 400
LTFSIPKHTL CEVFITVELI TETGTFGIAS RTLSRMQLPL HKCKDLWRAI
410
IREEKSQARW YPFEQP
Length:416
Mass (Da):47,321
Last modified:June 26, 2007 - v3
Checksum:iC1EA41E67E079C04
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284606 Genomic DNA. Translation: CAA96677.3.
PIRiT24770.
RefSeqiNP_510526.2. NM_078125.3.
UniGeneiCel.5618.

Genome annotation databases

EnsemblMetazoaiT10B10.5; T10B10.5; WBGene00011682.
GeneIDi181615.
KEGGicel:CELE_T10B10.5.
UCSCiT10B10.5. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284606 Genomic DNA. Translation: CAA96677.3.
PIRiT24770.
RefSeqiNP_510526.2. NM_078125.3.
UniGeneiCel.5618.

3D structure databases

ProteinModelPortaliQ22372.
SMRiQ22372. Positions 143-416.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.T10B10.5.

Proteomic databases

PaxDbiQ22372.
PRIDEiQ22372.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiT10B10.5; T10B10.5; WBGene00011682.
GeneIDi181615.
KEGGicel:CELE_T10B10.5.
UCSCiT10B10.5. c. elegans.

Organism-specific databases

CTDi181615.
WormBaseiT10B10.5; CE41018; WBGene00011682; snt-7.

Phylogenomic databases

eggNOGiKOG1028. Eukaryota.
ENOG410XRME. LUCA.
HOGENOMiHOG000018285.
InParanoidiQ22372.
OMAiRINEHFE.
OrthoDBiEOG7VX90S.
PhylomeDBiQ22372.

Miscellaneous databases

NextBioi914668.

Family and domain databases

Gene3Di2.60.40.150. 2 hits.
InterProiIPR000008. C2_dom.
[Graphical view]
PfamiPF00168. C2. 1 hit.
[Graphical view]
SMARTiSM00239. C2. 2 hits.
[Graphical view]
SUPFAMiSSF49562. SSF49562. 2 hits.
PROSITEiPS50004. C2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiQ22372_CAEEL
AccessioniPrimary (citable) accession number: Q22372
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: June 26, 2007
Last modified: May 11, 2016
This is version 117 of the entry and version 3 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.