Q22308 (Q22308_CAEEL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Protein DDX-19, isoform a EMBL CAA90408.1

Gene names

Name:	ddx-19 WormBase WBGene00011580 WormBase T07D4.4a
ORF Names:	T07D4.4 EMBL CAA90408.1 WormBase WBGene00011580

Organism

Caenorhabditis elegans

Taxonomic identifier

6239 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	1022 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular component	P granule Inferred from direct assay. Source: WormBase
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ATP-dependent helicase activity Inferred from electronic annotation. Source: InterPro nucleic acid binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q22308 [UniParc]. Last modified August 1, 1998. Version 2. Checksum: 50369A5331B01B65	FASTA	1,022	108,268
	10 20 30 40 50 60 MADWGIAFDE QCRSEGLEVP EKTEKVQSGS EMDQNEENKG SNGWGISRGG MFGGPKASNA 70 80 90 100 110 120 PPPQTSFGST SGTRVGGSFG GQAGVDGRGA PLGSAEELIG GGNIISVGIH KEKPACKRGG 130 140 150 160 170 180 GFGTNRSMAP CPPAIIKNNH EGGRFGVLAP RTLSGSIPQT STNLEDSTPK TSTGGRFGAS 190 200 210 220 230 240 ISQGGAFGAK TQSSSVAPSV GGGFGVKSPN IVSNDMPKVP VMKSVGGGFG SSMKSPATTG 250 260 270 280 290 300 GSFGSSTVVA SIRSEESFGI KSSASAGGSF NSSSASASQS RTVASFGSKP SNENISSNSS 310 320 330 340 350 360 ALSSSSSCFA AKPTSTSAGG SFGNQPSSFS SKPSFGGAFG ASTSVTGSSS MGGSFGNKST 370 380 390 400 410 420 KVPDVESLSP PEILRNPSNT SGGAFGSKPS FAASSSELPA NKHVVGGGFG RSTAPTVNTS 430 440 450 460 470 480 VGNESGRLPF VETRNPNTEQ ETSSSVRPYG ANFNSKSEPA QKNPFGGNSS STKPEFKENE 490 500 510 520 530 540 MKNSSVPIMP GQSQPMRGGF QGAYRGGRGS GGGQMDFGAP GQGQSMGRGR GQQNPAFVPR 550 560 570 580 590 600 PRDTPPQYGG HQAAQQFVKP DSKYKFTKPA TEEAHEQVPV PADIALLNKF IQKEVKMMKD 610 620 630 640 650 660 VVVDVQRQDP KSPLYSISSF RELRLKPEVL KALDTMNFQF PTRIQETALP LLLMEPPSNL 670 680 690 700 710 720 IAQAQSGTGK TAAFVLTMLC RIDVNLMCPQ CICLAPTLEL AKQIGEVVEK MGKFIDNLKI 730 740 750 760 770 780 HYAIKGGNMA AMRGRKLTEQ IVIGTPGITR DYLQKYKCID PSKIRCLVLD EADVMIYHQG 790 800 810 820 830 840 FTDISTTIYN MVEDASDSVQ SMLFSATYDE PVINFATKII KNAIVVMLKR EEQALPNIKQ 850 860 870 880 890 900 FYVQCACRDS KYAAIVNLYS GLAVASSVIF CHTKASVMWL YENMRARGHQ VDVLHGDMTV 910 920 930 940 950 960 VERADTIIHF KRGDFKVLIT TNVFARGIDV AQVSVVINYD LPIKYTDEGT PMVVDGFTQP 970 980 990 1000 1010 1020 DCETYLHRIG RTGRFGKTGI AINLIDSEDS MNMINVLENH FQMKIARMDP SNLVELEAIE MA

References

[1]	"Genome sequence of the nematode C. elegans: a platform for investigating biology." The C. elegans sequencing consortium Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bristol N2.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	Z50071 Genomic DNA. Translation: CAA90408.1.
PIR	T24663.
RefSeq	NP_495891.1. NM_063490.3.
UniGene	Cel.7700.
3D structure databases
HSSP	HSSP built from PDB template 1FUK based on UniProtKB P10081.
ProteinModelPortal	Q22308.
SMR	Q22308. Positions 581-1013.
ModBase	Search...
Protein-protein interaction databases
STRING	Q22308.
Proteomic databases
PRIDE	Q22308.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	T07D4.4a; T07D4.4a; T07D4.4.
GeneID	174418.
KEGG	cel:T07D4.4.
NMPDR	fig|6239.3.peg.6754.
UCSC	T07D4.4b.1. c. elegans.
Organism-specific databases
CTD	174418.
WormBase	T07D4.4a; CE18219; WBGene00011580; ddx-19.
Phylogenomic databases
GeneTree	EMGT00050000002694.
InParanoid	Q22308.
OMA	HEGGRFG.
PhylomeDB	Q22308.
Gene expression databases
ArrayExpress	Q22308.
Family and domain databases
InterPro	IPR014001. DEAD-like_helicase. IPR011545. DNA/RNA_helicase_DEAD/DEAH_N. IPR001650. Helicase_C. IPR014014. RNA_helicase_DEAD_Q_motif. [Graphical view]
Pfam	PF00270. DEAD. 1 hit. PF00271. Helicase_C. 1 hit. [Graphical view]
SMART	SM00487. DEXDc. 1 hit. SM00490. HELICc. 1 hit. [Graphical view]
PROSITE	PS51192. HELICASE_ATP_BIND_1. 1 hit. PS51194. HELICASE_CTER. 1 hit. PS51195. Q_MOTIF. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	883942.

Entry information

Entry name

Q22308_CAEEL

Accession

Primary (citable) accession number: Q22308

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1996
Last sequence update:	August 1, 1998
Last modified:	January 25, 2012
This is version 90 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)