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Protein
Submitted name:

Mitochondrial Ribosomal Protein, Large

Gene

mrpl-16

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinImported

Names & Taxonomyi

Protein namesi
Submitted name:
Mitochondrial Ribosomal Protein, LargeImported
Gene namesi
Name:mrpl-16Imported
ORF Names:CELE_T04A8.11Imported, T04A8.11Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome III

Organism-specific databases

WormBaseiT04A8.11; CE43532; WBGene00011412; mrpl-16.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

EPDiQ22140.
PaxDbiQ22140.
PeptideAtlasiQ22140.

Expressioni

Gene expression databases

BgeeiWBGene00011412.

Interactioni

Protein-protein interaction databases

DIPiDIP-25722N.
IntActiQ22140. 1 interactor.
MINTiMINT-1083540.
STRINGi6239.T04A8.11.3.

Structurei

3D structure databases

ProteinModelPortaliQ22140.
SMRiQ22140.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini60 – 188Ribosomal_L16InterPro annotationAdd BLAST129

Phylogenomic databases

eggNOGiKOG3422. Eukaryota.
COG0197. LUCA.
GeneTreeiENSGT00390000002038.
HOGENOMiHOG000021349.
InParanoidiQ22140.
KOiK02878.
OMAiIRPPKMQ.
OrthoDBiEOG091G0KF0.
PhylomeDBiQ22140.

Family and domain databases

CDDicd01433. Ribosomal_L16_L10e. 1 hit.
Gene3Di3.90.1170.10. 1 hit.
InterProiIPR016180. Ribosomal_L10e/L16.
IPR000114. Ribosomal_L16.
[Graphical view]
PANTHERiPTHR12220. PTHR12220. 1 hit.
PfamiPF00252. Ribosomal_L16. 1 hit.
[Graphical view]
SUPFAMiSSF54686. SSF54686. 1 hit.

Sequencei

Sequence statusi: Complete.

Q22140-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MINLRCVCRA PVANLTQFTR GMKKYSFPVT YENVRFPPNG QLKLPVMPAE
60 70 80 90 100
PFYDAEKGEK KYKSTKRMIE ARGVEEVHTE LIHEQYGLAA VSGGFIDSDD
110 120 130 140 150
FKFIQDRINK NLIDNQFSVW RVDAPWLPRT KKAQGTRLGG GKGSIQKYVT
160 170 180 190 200
PVRANRIILE VGGHITEIEA KAFLLYLCER FSFPVEFVSE TMLAERRKKA
210 220 230 240
EEERAMNKNG FNWGKVIKYN MQNCNSWLSS YDVAWKGKYR
Length:240
Mass (Da):27,706
Last modified:May 5, 2009 - v2
Checksum:i4A45D40269D42E3D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284603 Genomic DNA. Translation: CAA84730.2.
RefSeqiNP_497965.2. NM_065564.5.
UniGeneiCel.10095.

Genome annotation databases

EnsemblMetazoaiT04A8.11.1; T04A8.11.1; WBGene00011412.
T04A8.11.2; T04A8.11.2; WBGene00011412.
GeneIDi188040.
KEGGicel:CELE_T04A8.11.
UCSCiT04A8.11. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284603 Genomic DNA. Translation: CAA84730.2.
RefSeqiNP_497965.2. NM_065564.5.
UniGeneiCel.10095.

3D structure databases

ProteinModelPortaliQ22140.
SMRiQ22140.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-25722N.
IntActiQ22140. 1 interactor.
MINTiMINT-1083540.
STRINGi6239.T04A8.11.3.

Proteomic databases

EPDiQ22140.
PaxDbiQ22140.
PeptideAtlasiQ22140.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiT04A8.11.1; T04A8.11.1; WBGene00011412.
T04A8.11.2; T04A8.11.2; WBGene00011412.
GeneIDi188040.
KEGGicel:CELE_T04A8.11.
UCSCiT04A8.11. c. elegans.

Organism-specific databases

CTDi188040.
WormBaseiT04A8.11; CE43532; WBGene00011412; mrpl-16.

Phylogenomic databases

eggNOGiKOG3422. Eukaryota.
COG0197. LUCA.
GeneTreeiENSGT00390000002038.
HOGENOMiHOG000021349.
InParanoidiQ22140.
KOiK02878.
OMAiIRPPKMQ.
OrthoDBiEOG091G0KF0.
PhylomeDBiQ22140.

Gene expression databases

BgeeiWBGene00011412.

Family and domain databases

CDDicd01433. Ribosomal_L16_L10e. 1 hit.
Gene3Di3.90.1170.10. 1 hit.
InterProiIPR016180. Ribosomal_L10e/L16.
IPR000114. Ribosomal_L16.
[Graphical view]
PANTHERiPTHR12220. PTHR12220. 1 hit.
PfamiPF00252. Ribosomal_L16. 1 hit.
[Graphical view]
SUPFAMiSSF54686. SSF54686. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ22140_CAEEL
AccessioniPrimary (citable) accession number: Q22140
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: May 5, 2009
Last modified: November 30, 2016
This is version 117 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.