Q220Y8 (Q220Y8_RHOFD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Polysaccharide deacetylase EMBL ABD68415.1

Gene names

Ordered Locus Names:

Rfer_0664

Organism

Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) [Complete proteome] [HAMAP]

Taxonomic identifier

338969 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Comamonadaceae › Albidiferax

Protein attributes

Sequence length	291 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q220Y8 [UniParc]. Last modified April 18, 2006. Version 1. Checksum: BEC5BD5DDB19E5B2	FASTA	291	33,475
	10 20 30 40 50 60 MKDAPPVEPV TNALTIDVED YFQVSAFAPH IARSEWNLRE CRVERNVDCI LEMLANSDTK 70 80 90 100 110 120 ATFFTLGWIA ERYPELVRHI VREGHELASH GYGHERASDQ TEAAFFADIQ LAKIVLEDLS 130 140 150 160 170 180 GSEVNGYRAP SFSIGSGNLW AFDCLARAGY RYSSSVYPIR HDHYGMPESP RFAYEVRPGL 190 200 210 220 230 240 MEIPITTLRV FNRNLPSSGG GYFRLLPYAW SRWMLSRVNG HEHESGVFYF HPWEIDPGQP 250 260 270 280 290 RIDGISSKTR FRHYFNIDRM EGRLNQLLGD FKWGRMDQIF LDRFSQPVSV A

References

[1]

"Complete sequence of chromosome of Rhodoferax ferrireducens DSM 15236." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Kiss H., Schmutz J., Larimer F., Land M. , Kyrpides N., Ivanova N., Richardson P. Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000267 Genomic DNA. Translation: ABD68415.1.
RefSeq	YP_521946.1. NC_007908.1.
3D structure databases
ProteinModelPortal	Q220Y8.
ModBase	Search...
Protein-protein interaction databases
STRING	Q220Y8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3963849.
GenomeReviews	Gene locus Rfer_0664 in contig CP000267_GR.
KEGG	rfr:Rfer_0664.
NMPDR	fig|338969.3.peg.555.
PATRIC	23233847. VBIRhoFer131161_0948.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0726.
HOGENOM	HBG612640.
OMA	VEDYFQV.
ProtClustDB	CLSK839856.
Enzyme and pathway databases
BioCyc	RFER338969:RFER_0664-MONOMER.
Family and domain databases
InterPro	IPR022560. DUF3473. IPR011330. Glyco_hydro/deAcase_b/a-brl. IPR014344. PEP-CTERM_polysacc_deacetyl. IPR002509. Polysac_deacetylase. [Graphical view]
Gene3D	G3DSA:3.20.20.370. Polysac_deacetylase. 2 hits.
Pfam	PF11959. DUF3473. 1 hit. PF01522. Polysacc_deac_1. 1 hit. [Graphical view]
SUPFAM	SSF88713. Glyco_hydro/deAcase_b/a-brl. 1 hit.
TIGRFAMs	TIGR03006. PepC_polyde. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q220Y8_RHOFD

Accession

Primary (citable) accession number: Q220Y8

Entry history

Integrated into UniProtKB/TrEMBL:	April 18, 2006
Last sequence update:	April 18, 2006
Last modified:	December 14, 2011
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)