Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Methyl-accepting chemotaxis sensory transducer

Gene

Rfer_0898

Organism
Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118) (Albidiferax ferrireducens)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Methyl-accepting chemotaxis sensory transducerImported
Gene namesi
Ordered Locus Names:Rfer_0898Imported
OrganismiRhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118) (Albidiferax ferrireducens)Imported
Taxonomic identifieri338969 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeRhodoferax
Proteomesi
  • UP000008332 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei7 – 23HelicalSequence analysisAdd BLAST17
Transmembranei29 – 50HelicalSequence analysisAdd BLAST22

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi338969.Rfer_0898.

Structurei

3D structure databases

ProteinModelPortaliQ220A7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini83 – 300Methyl-accepting transducerInterPro annotationAdd BLAST218

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4108R56. Bacteria.
ENOG4111FGI. LUCA.
HOGENOMiHOG000273208.
KOiK03406.
OMAiQWLARME.
OrthoDBiPOG091H0QRR.

Family and domain databases

InterProiView protein in InterPro
IPR004090. Chemotax_Me-accpt_rcpt.
IPR004089. MCPsignal_dom.
PfamiView protein in Pfam
PF00015. MCPsignal. 1 hit.
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiView protein in SMART
SM00283. MA. 1 hit.
PROSITEiView protein in PROSITE
PS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Q220A7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNRMHHFFYP LALGLAGALA VLMTGGLGWA AIGLALLLAV AGLALGLRLA
60 70 80 90 100
AQHTARVQSV DRYLAAQQQF GERVAPIWSG HIESSRQQME SAVAALSERF
110 120 130 140 150
GGIVDKLDAA VHTASLETEI LDDADKGLVA MFDRSEQDLG AVITAQKSAM
160 170 180 190 200
SSMVSMLERV QGLDGFIVEL QDMALDVAKI AQQSNLLSLN AAIEAARAGD
210 220 230 240 250
LGRGFAVVAQ EFRMLSTQSG DTGRRIAEKV SIISAAIVDA CHVVQDAVKQ
260 270 280 290 300
RDGRVRTTEA TIGRVLSEFK DITDTLQRSS AQLKDESIGI KAEIGEALVQ
310 320 330 340 350
LQFQDRVSQI MTQVRNNIEQ LPDFLQQQAQ VRSQAGELQP LDPQALLTEL
360 370
KGTYVMADQH VIHAGGQVEA KTDDEITFF
Length:379
Mass (Da):40,920
Last modified:April 18, 2006 - v1
Checksum:iA58800916C881A8B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000267 Genomic DNA. Translation: ABD68646.1.
RefSeqiWP_011463219.1. NC_007908.1.

Genome annotation databases

EnsemblBacteriaiABD68646; ABD68646; Rfer_0898.
KEGGirfr:Rfer_0898.
PATRICi23234317. VBIRhoFer131161_1183.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000267 Genomic DNA. Translation: ABD68646.1.
RefSeqiWP_011463219.1. NC_007908.1.

3D structure databases

ProteinModelPortaliQ220A7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi338969.Rfer_0898.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABD68646; ABD68646; Rfer_0898.
KEGGirfr:Rfer_0898.
PATRICi23234317. VBIRhoFer131161_1183.

Phylogenomic databases

eggNOGiENOG4108R56. Bacteria.
ENOG4111FGI. LUCA.
HOGENOMiHOG000273208.
KOiK03406.
OMAiQWLARME.
OrthoDBiPOG091H0QRR.

Family and domain databases

InterProiView protein in InterPro
IPR004090. Chemotax_Me-accpt_rcpt.
IPR004089. MCPsignal_dom.
PfamiView protein in Pfam
PF00015. MCPsignal. 1 hit.
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiView protein in SMART
SM00283. MA. 1 hit.
PROSITEiView protein in PROSITE
PS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ220A7_RHOFT
AccessioniPrimary (citable) accession number: Q220A7
Entry historyiIntegrated into UniProtKB/TrEMBL: April 18, 2006
Last sequence update: April 18, 2006
Last modified: May 10, 2017
This is version 58 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.