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Q220A3 (Q220A3_ALBFT) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Rfer_0902 EMBL ABD68650.1
OrganismAlbidiferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118) (Rhodoferax ferrireducens) [Complete proteome] [HAMAP] EMBL ABD68650.1
Taxonomic identifier338969 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeRhodoferax

Protein attributes

Sequence length550 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABD68650.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2727 Potential EMBL ABD68650.1
Chain28 – 550523 Potential EMBL ABD68650.1
PRO_5000110224

Sequences

Sequence LengthMass (Da)Tools
Q220A3 [UniParc].

Last modified April 18, 2006. Version 1.
Checksum: EFCED92336A22376

FASTA55057,915
        10         20         30         40         50         60 
MFSNMKIGMR LTLGFAIVLL LMAALAAMGI NGMAKIEGEL DGVINDNMVK IKLSEEMATQ 

        70         80         90        100        110        120 
VHIVTRLMRT AVLLKDPAAV AGEYKKIASA RQKYAAAFDS LEKMTTDEKG KAMMTKVKFQ 

       130        140        150        160        170        180 
LAEATPLNDK VMALDEAGKD DDAVQFLVSV AAPATAKVQD VLDENVNLLE EDTRLDYANA 

       190        200        210        220        230        240 
KAAYEFAFKV MVTLATMAFL FGALLAWFLT RSITGPVNKA LNVANRLSEG DLTVRIDAVS 

       250        260        270        280        290        300 
KDETGQMLQA MSNMISKLSI VVADVNSGAQ NLASASEEVS ATAQSLSQAA SEQAAGVEET 

       310        320        330        340        350        360 
SASIEQMTAS ISQNTENAKV TDGMASQAAK QAVEGGESVA ATVAAMKQIA KKIGIIDDIA 

       370        380        390        400        410        420 
YQTNLLALNA AIEAARAGEH GKGFAVVAAE VRKLAERSQI AAQEIGEVAS SSVELAEKAG 

       430        440        450        460        470        480 
KLLDEIVPRI KKTSDLVQEI TAASEEQSSG AGQINSAISQ LNQTTQQNAS SSEELAATSE 

       490        500        510        520        530        540 
EMSSQAEQLQ QTMSFFKMEG SSAVVRRPVA HKPTSSPKSA TSKIGGMAKA AALSLSGAGA 

       550 
DIDESKFSKF 

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References

[1]"Complete sequence of chromosome of Rhodoferax ferrireducens DSM 15236."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Kiss H., Schmutz J., Larimer F., Land M. expand/collapse author list , Kyrpides N., Ivanova N., Richardson P.
Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-621 / DSM 15236 / T118.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000267 Genomic DNA. Translation: ABD68650.1.
RefSeqYP_522181.1. NC_007908.1.

3D structure databases

ProteinModelPortalQ220A3.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING338969.Rfer_0902.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABD68650; ABD68650; Rfer_0902.
GeneID3963618.
KEGGrfr:Rfer_0902.
PATRIC23234325. VBIRhoFer131161_1187.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000148074.
KOK03406.
OMAYESARNT.
OrthoDBEOG60W7RK.

Enzyme and pathway databases

BioCycAFER338969:GHU9-905-MONOMER.

Family and domain databases

InterProIPR024478. 4HB_MCP.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF12729. 4HB_MCP_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 2 hits.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ220A3_ALBFT
AccessionPrimary (citable) accession number: Q220A3
Entry history
Integrated into UniProtKB/TrEMBL: April 18, 2006
Last sequence update: April 18, 2006
Last modified: June 11, 2014
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)