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Protein
Submitted name:

CDT (S. pombe CDC10 Dependent Transcript) homolog

Gene

cdt-2

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

  • proteasome-mediated ubiquitin-dependent protein catabolic process Source: WormBase

Enzyme and pathway databases

ReactomeiR-CEL-8951664. Neddylation.
SignaLinkiQ22059.

Names & Taxonomyi

Protein namesi
Submitted name:
CDT (S. pombe CDC10 Dependent Transcript) homologImported
Gene namesi
Name:cdt-2Imported
ORF Names:CELE_T01C3.1Imported, T01C3.1Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiT01C3.1; CE42358; WBGene00011318; cdt-2.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

EPDiQ22059.
PaxDbiQ22059.
PeptideAtlasiQ22059.

Expressioni

Gene expression databases

BgeeiWBGene00011318.

Interactioni

Protein-protein interaction databases

STRINGi6239.T01C3.1.

Structurei

3D structure databases

ProteinModelPortaliQ22059.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini89 – 177WD_REPEATS_REGIONInterPro annotationAdd BLAST89
Repeati89 – 131WDPROSITE-ProRule annotationAdd BLAST43
Repeati135 – 177WDPROSITE-ProRule annotationAdd BLAST43

Keywords - Domaini

WD repeatPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG0321. Eukaryota.
ENOG410XRWK. LUCA.
GeneTreeiENSGT00530000064210.
HOGENOMiHOG000019502.
InParanoidiQ22059.
KOiK11790.
OMAiNTHPLLA.
OrthoDBiEOG091G04RK.
PhylomeDBiQ22059.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
InterProiView protein in InterPro
IPR020472. G-protein_beta_WD-40_rep.
IPR015943. WD40/YVTN_repeat-like_dom_sf.
IPR001680. WD40_repeat.
IPR017986. WD40_repeat_dom.
IPR036322. WD40_repeat_dom_sf.
PfamiView protein in Pfam
PF00400. WD40. 2 hits.
PRINTSiPR00320. GPROTEINBRPT.
SMARTiView protein in SMART
SM00320. WD40. 6 hits.
SUPFAMiSSF50978. SSF50978. 2 hits.
PROSITEiView protein in PROSITE
PS50082. WD_REPEATS_2. 2 hits.
PS50294. WD_REPEATS_REGION. 1 hit.

Sequencei

Sequence statusi: Complete.

Q22059-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDFLHSTKAR KRYLRYPSSI YEELESKHYS MPAGETDDHD TWVTARFSPH
60 70 80 90 100
LNQEHILYMG DDPGNIGIFD VRKFQDRSVP LEERQLYFFP AHDGAIMDVV
110 120 130 140 150
GVPQKESQIV SISGDSTIRC WDLNQSTLDR KSQVFFGHEG SVRSICFAPD
160 170 180 190 200
DPNVFVTGGR DFQVKIWDMR VSTVKKMEED CRMATITYKT AHPKPSKVLT
210 220 230 240 250
SGTPKSKAKA KTIEGYKVTS VLFLDEHHVA SASENADSGI RVWDIRKPTR
260 270 280 290 300
NGEGQPARIL KVPTSNKKSY GVTCLTLDRF GNRLFASCTD SSIFEYSVPS
310 320 330 340 350
ESVSPINSYT GATIHNFYTQ VACSPVSDVI ACGSEDSRAV VWDLQDQYNY
360 370 380 390 400
MNDRKLPDDI DKRRTKLPRF SCDGHLKQVL NVGWSSRGTY FMSCDEGGVR
410 420 430 440 450
IWSEPRNRCT WKLNDEDDTS YPTTSQELGL SYEKIKKFEL KESDEAMSCF
460 470 480 490 500
DSISLSPRQR ADSSGLSGSP QKNRGSKRPI FESPLKSICT NSPKPLRLNR
510 520 530 540 550
SPRAKMSKLS FSPPSPLQPT NSNNQDLVGY RTPRQIRNKK KKNNPFYNEH
560 570 580 590 600
PTEGLPNFVY DTFVKKLIGE SSKSDIEDSG KSLSKTGQKR IEDWWQTKGE
610 620 630 640 650
NVATVTRARL PSVSEFGESA CSKVITEDER IALHSPRKLV LKSSSTQSPC
660 670 680
PSNSKPKPIP MTPRKPMDKR PTSRNLLHYF KK
Length:682
Mass (Da):77,142
Last modified:April 29, 2008 - v2
Checksum:i24A15CE803C7AE27
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA. Translation: CAB01663.2.
RefSeqiNP_506685.2. NM_074284.4.
UniGeneiCel.5901.

Genome annotation databases

EnsemblMetazoaiT01C3.1; T01C3.1; WBGene00011318.
GeneIDi179995.
KEGGicel:CELE_T01C3.1.
UCSCiT01C3.1. c. elegans.

Similar proteinsi

Entry informationi

Entry nameiQ22059_CAEEL
AccessioniPrimary (citable) accession number: Q22059
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: April 29, 2008
Last modified: November 22, 2017
This is version 146 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported