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Protein
Submitted name:

RAB family

Gene

rab-21

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
RAB familyImported
Gene namesi
Name:rab-21Imported
ORF Names:CELE_T01B7.3Imported, T01B7.3Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome II

Organism-specific databases

WormBaseiT01B7.3; CE03587; WBGene00004279; rab-21.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

EPDiQ22045.
PaxDbiQ22045.

Expressioni

Gene expression databases

BgeeiWBGene00004279.
ExpressionAtlasiQ22045. baseline.

Interactioni

Protein-protein interaction databases

IntActiQ22045. 1 interaction.
STRINGi6239.T01B7.3.1.

Structurei

3D structure databases

ProteinModelPortaliQ22045.
SMRiQ22045. Positions 10-174.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiKOG0088. Eukaryota.
ENOG410XQT5. LUCA.
GeneTreeiENSGT00760000119101.
HOGENOMiHOG000233968.
InParanoidiQ22045.
KOiK07890.
OMAiIDDCKAE.
OrthoDBiEOG091G0HKN.
PhylomeDBiQ22045.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR001806. Small_GTPase.
[Graphical view]
PfamiPF00071. Ras. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00231. small_GTP. 1 hit.

Sequencei

Sequence statusi: Complete.

Q22045-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLETNVDQKS FKFKIVLLGE GCVGKSSLVL RFVENKFSCK HLSTIQASFQ
60 70 80 90 100
NKTVNVEDCQ ADLHIWDTAG QEKYHALGPI YYRGSNGVLL VFDITDRKSF
110 120 130 140 150
EKVKNWVLEI KTCLGNTAEI LIVGNKIDLE EERQVTRQDA EAYAESEGAL
160 170 180 190 200
YMETSAQDNV GISDAFESLT AKMIEHSRTR STEPPSTNRS IRLIDNDEAE

RSKKCCR
Length:207
Mass (Da):23,377
Last modified:November 1, 1996 - v1
Checksum:i15806AC67BB56E4B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284602 Genomic DNA. Translation: CAA91296.1.
PIRiT24268.
RefSeqiNP_495854.1. NM_063453.3.
UniGeneiCel.14505.

Genome annotation databases

EnsemblMetazoaiT01B7.3; T01B7.3; WBGene00004279.
GeneIDi187932.
KEGGicel:CELE_T01B7.3.
UCSCiT01B7.3. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284602 Genomic DNA. Translation: CAA91296.1.
PIRiT24268.
RefSeqiNP_495854.1. NM_063453.3.
UniGeneiCel.14505.

3D structure databases

ProteinModelPortaliQ22045.
SMRiQ22045. Positions 10-174.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ22045. 1 interaction.
STRINGi6239.T01B7.3.1.

Proteomic databases

EPDiQ22045.
PaxDbiQ22045.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiT01B7.3; T01B7.3; WBGene00004279.
GeneIDi187932.
KEGGicel:CELE_T01B7.3.
UCSCiT01B7.3. c. elegans.

Organism-specific databases

CTDi187932.
WormBaseiT01B7.3; CE03587; WBGene00004279; rab-21.

Phylogenomic databases

eggNOGiKOG0088. Eukaryota.
ENOG410XQT5. LUCA.
GeneTreeiENSGT00760000119101.
HOGENOMiHOG000233968.
InParanoidiQ22045.
KOiK07890.
OMAiIDDCKAE.
OrthoDBiEOG091G0HKN.
PhylomeDBiQ22045.

Gene expression databases

BgeeiWBGene00004279.
ExpressionAtlasiQ22045. baseline.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR001806. Small_GTPase.
[Graphical view]
PfamiPF00071. Ras. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00231. small_GTP. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ22045_CAEEL
AccessioniPrimary (citable) accession number: Q22045
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: September 7, 2016
This is version 127 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.