Unreviewed, UniProtKB/TrEMBL Q22030 (Q22030_CAEEL)

Names and origin

Protein names

Submitted name:
    Protein R74.5a, confirmed by transcript evidence EMBL CAA85276.1
Submitted name:
    RNA-binding protein ASD-1 EMBL ABF22491.1

Gene names

Name:	asd-1 WormBase WBGene00011279 WormPep R74.5a
ORF Names:	R74.5 WormBase WBGene00011279 WormPep R74.5a, R74.5a EMBL CAA85276.1

Organism

Caenorhabditis elegans [Complete proteome]

Taxonomic identifier

6239 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	404 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	nucleic acid binding Inferred from electronic annotation. Source: InterPro nucleotide binding Inferred from electronic annotation. Source: InterPro protein binding Inferred from physical interaction. Source: IntAct
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q22030-1 [UniParc]. Last modified November 1, 1996. Version 1. Checksum: A4783FFB9A37EFC5	FASTA	404	43,790
	10 20 30 40 50 60 MTTAAEIITV EKLNDFDYKV ALQQQMVAAQ NGAAAAVLRP HQIGSSPEAP QSQTSGGSTE 70 80 90 100 110 120 QLQQQPLPPP TQQKQQQPLT IGPVAPNDRS TSSSSTDGPR RLHVSNIPFK YREPDLTAMF 130 140 150 160 170 180 EKVGPVVDVE IIFNERGSKG FGFVTMQNPD DADRARAEFN GTTIEGRRVE VNLATQRVHN 190 200 210 220 230 240 KKAKPLMSVG VDAMSAQNAL ISQQQQIQRA ALLQQQLLAQ QFLVPRHQQL MMPPTSAAAI 250 260 270 280 290 300 SQLQALQYQQ ALLAAQQQQQ QMQNPQFLLS LQQQQQAQAQ APPTSMAQLI QHQQQFAMDP 310 320 330 340 350 360 MAQAQAQAAQ AQMVTLIAFE QQRMQLQAAA AAAQGRGVPQ PGRIPTSTAT TGSSQNQVAA 370 380 390 400 GSIGEQYLQQ SMQGAVPANF HHHSQALHPA AAAAAALQRR FAPY

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Genome sequence of the nematode C. elegans: a platform for investigating biology." The C. elegans sequencing consortium Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bristol N2.
[2]	"Transgenic alternative-splicing reporters reveal tissue-specific expression profiles and regulation mechanisms in vivo." Kuroyanagi H., Kobayashi T., Mitani S., Hagiwara M. Nat. Methods 3:909-915(2006) [PubMed: 17060915] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: N2 EMBL ABF22491.1.

Cross-references

Sequence databases
EMBLGenBankDDBJ	DQ485531 mRNA. Translation: ABF22491.1. Z36238 Genomic DNA. Translation: CAA85276.1.
PIR	T24255.
RefSeq	NP_497841.1.
UniGene	Cel.17456
3D structure databases
HSSP	HSSP built from PDB template 1P1T based on UniProtKB P33240.
ModBase	Search...
Protein-protein interaction databases
DIP	DIP:25848N.
IntAct	Q22030. 5 interactions.
Genome annotation databases
Ensembl	R74.5. Caenorhabditis elegans. [Contig view]
GeneID	175542.
KEGG	cel:R74.5.
Organism-specific databases
WormBase	WBGene00011279. asd-1.
WormPep	R74.5a. CE01058. [WorfDB]
Phylogenomic databases
OMA	Q22030. KKAKPLM.
Gene expression databases
ArrayExpress	Q22030.
Family and domain databases
InterPro	IPR012677. a_b_plait_nuc_bd. IPR000504. RRM_RNP1. [Graphical view]
Gene3D	G3DSA:3.30.70.330. a_b_plait_nuc_bd. 1 hit.
Pfam	PF00076. RRM_1. 1 hit. [Graphical view]
SMART	SM00360. RRM. 1 hit. [Graphical view]
PROSITE	PS50102. RRM. 1 hit. [Graphical view]
ProtoNet	Search...
Other Resources
NextBio	888594.

Entry information

Entry name

Q22030_CAEEL

Accession

Primary (citable) accession number: Q22030

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1996
Last sequence update:	November 1, 1996
Last modified:	May 5, 2009
This is version 67 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)