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Protein
Submitted name:

Methyl-accepting chemotaxis sensory transducer

Gene

Rfer_0925

Organism
Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118) (Albidiferax ferrireducens)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Methyl-accepting chemotaxis sensory transducerImported
Gene namesi
Ordered Locus Names:Rfer_0925Imported
OrganismiRhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118) (Albidiferax ferrireducens)Imported
Taxonomic identifieri338969 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeRhodoferax
Proteomesi
  • UP000008332 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei15 – 36HelicalSequence analysisAdd BLAST22
Transmembranei193 – 211HelicalSequence analysisAdd BLAST19

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi338969.Rfer_0925.

Structurei

3D structure databases

ProteinModelPortaliQ21ZY1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini213 – 265HAMPInterPro annotationAdd BLAST53
Domaini270 – 499Methyl-accepting transducerInterPro annotationAdd BLAST230

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4105C8Q. Bacteria.
COG0840. LUCA.
HOGENOMiHOG000148074.
OMAiSNDEMAT.
OrthoDBiPOG091H0QRR.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
InterProiIPR024478. 4HB_MCP.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF12729. 4HB_MCP_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q21ZY1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKIFTSLKIG PRLGLGFALV LAFVALISGI AIWELHAVAQ EARQMMQEPL
60 70 80 90 100
AKERHISEWS RVINVAVIRT SAIAKSSDPA LVSFFAANAA ETTKIAADLH
110 120 130 140 150
KVIEPMMTSN EEKKLFSTIS KVRQDYLASR NQVGKLKAEG KSDEANDTLE
160 170 180 190 200
KAFVPISESY IKLVGELLEV QRKTLDQKAS QISDIEQSSR TTLLALTLLT
210 220 230 240 250
IAVGAAFAWL LTKGITGPLS DAAVALRRVS EGDLANHISP QGRDETAQLL
260 270 280 290 300
HVLKDMQTRL ASVVSQVRQG SERVAIASAE IAQGNHDLSD RTEQQASALE
310 320 330 340 350
ETAASMEELS STVKQNADNA RQANQLAQSA STVAIKGGSV VGQVVETMKG
360 370 380 390 400
INDASRKISD IISVIDGIAF QTNILALNAA VEAARAGEQG RGFAVVASEV
410 420 430 440 450
RSLAGRSADA AKEIKILINT SVERVAQGTT LVDQAGVTMT EVVSSIKRVT
460 470 480 490 500
DLMGEISAAS SEQSQGVAQV GEAVTQMDQA TQQNAALVEE MAAAASSLNS
510 520 530 540 550
QAQDLVQTVA VFNLGANEAH QGSALASRSI RSQQTSTVGY KSAERRSLAA

PA
Length:552
Mass (Da):58,482
Last modified:April 18, 2006 - v1
Checksum:iD701EA4164A3CA78
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000267 Genomic DNA. Translation: ABD68672.1.

Genome annotation databases

EnsemblBacteriaiABD68672; ABD68672; Rfer_0925.
KEGGirfr:Rfer_0925.
PATRICi23234377. VBIRhoFer131161_1213.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000267 Genomic DNA. Translation: ABD68672.1.

3D structure databases

ProteinModelPortaliQ21ZY1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi338969.Rfer_0925.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABD68672; ABD68672; Rfer_0925.
KEGGirfr:Rfer_0925.
PATRICi23234377. VBIRhoFer131161_1213.

Phylogenomic databases

eggNOGiENOG4105C8Q. Bacteria.
COG0840. LUCA.
HOGENOMiHOG000148074.
OMAiSNDEMAT.
OrthoDBiPOG091H0QRR.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
InterProiIPR024478. 4HB_MCP.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF12729. 4HB_MCP_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ21ZY1_RHOFT
AccessioniPrimary (citable) accession number: Q21ZY1
Entry historyi
Integrated into UniProtKB/TrEMBL: April 18, 2006
Last sequence update: April 18, 2006
Last modified: November 2, 2016
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.