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Protein
Submitted name:

Methyl-accepting chemotaxis sensory transducer

Gene

Rfer_0925

Organism
Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118) (Albidiferax ferrireducens)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionTransducerPROSITE-ProRule annotation

Enzyme and pathway databases

BioCyciAFER338969:GHU9-914-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
Methyl-accepting chemotaxis sensory transducerImported
Gene namesi
Ordered Locus Names:Rfer_0925Imported
OrganismiRhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118) (Albidiferax ferrireducens)Imported
Taxonomic identifieri338969 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeRhodoferax
Proteomesi
  • UP000008332 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei15 – 36HelicalSequence analysisAdd BLAST22
Transmembranei193 – 211HelicalSequence analysisAdd BLAST19

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi338969.Rfer_0925

Structurei

3D structure databases

ProteinModelPortaliQ21ZY1
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini213 – 265HAMPInterPro annotationAdd BLAST53
Domaini270 – 499Methyl-accepting transducerInterPro annotationAdd BLAST230

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili289 – 309Sequence analysisAdd BLAST21
Coiled coili477 – 497Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4105C8Q Bacteria
COG0840 LUCA
HOGENOMiHOG000148074
OMAiDESRANH
OrthoDBiPOG091H0QRR

Family and domain databases

CDDicd06225 HAMP, 1 hit
InterProiView protein in InterPro
IPR004090 Chemotax_Me-accpt_rcpt
IPR003660 HAMP_dom
IPR024478 HlyB_4HB_MCP
IPR004089 MCPsignal_dom
PfamiView protein in Pfam
PF12729 4HB_MCP_1, 1 hit
PF00015 MCPsignal, 1 hit
PRINTSiPR00260 CHEMTRNSDUCR
SMARTiView protein in SMART
SM00304 HAMP, 1 hit
SM00283 MA, 1 hit
PROSITEiView protein in PROSITE
PS50111 CHEMOTAXIS_TRANSDUC_2, 1 hit
PS50885 HAMP, 1 hit

Sequencei

Sequence statusi: Complete.

Q21ZY1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKIFTSLKIG PRLGLGFALV LAFVALISGI AIWELHAVAQ EARQMMQEPL
60 70 80 90 100
AKERHISEWS RVINVAVIRT SAIAKSSDPA LVSFFAANAA ETTKIAADLH
110 120 130 140 150
KVIEPMMTSN EEKKLFSTIS KVRQDYLASR NQVGKLKAEG KSDEANDTLE
160 170 180 190 200
KAFVPISESY IKLVGELLEV QRKTLDQKAS QISDIEQSSR TTLLALTLLT
210 220 230 240 250
IAVGAAFAWL LTKGITGPLS DAAVALRRVS EGDLANHISP QGRDETAQLL
260 270 280 290 300
HVLKDMQTRL ASVVSQVRQG SERVAIASAE IAQGNHDLSD RTEQQASALE
310 320 330 340 350
ETAASMEELS STVKQNADNA RQANQLAQSA STVAIKGGSV VGQVVETMKG
360 370 380 390 400
INDASRKISD IISVIDGIAF QTNILALNAA VEAARAGEQG RGFAVVASEV
410 420 430 440 450
RSLAGRSADA AKEIKILINT SVERVAQGTT LVDQAGVTMT EVVSSIKRVT
460 470 480 490 500
DLMGEISAAS SEQSQGVAQV GEAVTQMDQA TQQNAALVEE MAAAASSLNS
510 520 530 540 550
QAQDLVQTVA VFNLGANEAH QGSALASRSI RSQQTSTVGY KSAERRSLAA

PA
Length:552
Mass (Da):58,482
Last modified:April 18, 2006 - v1
Checksum:iD701EA4164A3CA78
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000267 Genomic DNA Translation: ABD68672.1

Genome annotation databases

EnsemblBacteriaiABD68672; ABD68672; Rfer_0925
KEGGirfr:Rfer_0925

Similar proteinsi

Entry informationi

Entry nameiQ21ZY1_RHOFT
AccessioniPrimary (citable) accession number: Q21ZY1
Entry historyiIntegrated into UniProtKB/TrEMBL: April 18, 2006
Last sequence update: April 18, 2006
Last modified: March 28, 2018
This is version 68 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported