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Q21ZY1 (Q21ZY1_ALBFT) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Rfer_0925 EMBL ABD68672.1
OrganismAlbidiferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118) (Rhodoferax ferrireducens) [Complete proteome] [HAMAP] EMBL ABD68672.1
Taxonomic identifier338969 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeRhodoferax

Protein attributes

Sequence length552 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABD68672.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 4040 Potential EMBL ABD68672.1
Chain41 – 552512 Potential EMBL ABD68672.1
PRO_5000110233

Sequences

Sequence LengthMass (Da)Tools
Q21ZY1 [UniParc].

Last modified April 18, 2006. Version 1.
Checksum: D701EA4164A3CA78

FASTA55258,482
        10         20         30         40         50         60 
MKIFTSLKIG PRLGLGFALV LAFVALISGI AIWELHAVAQ EARQMMQEPL AKERHISEWS 

        70         80         90        100        110        120 
RVINVAVIRT SAIAKSSDPA LVSFFAANAA ETTKIAADLH KVIEPMMTSN EEKKLFSTIS 

       130        140        150        160        170        180 
KVRQDYLASR NQVGKLKAEG KSDEANDTLE KAFVPISESY IKLVGELLEV QRKTLDQKAS 

       190        200        210        220        230        240 
QISDIEQSSR TTLLALTLLT IAVGAAFAWL LTKGITGPLS DAAVALRRVS EGDLANHISP 

       250        260        270        280        290        300 
QGRDETAQLL HVLKDMQTRL ASVVSQVRQG SERVAIASAE IAQGNHDLSD RTEQQASALE 

       310        320        330        340        350        360 
ETAASMEELS STVKQNADNA RQANQLAQSA STVAIKGGSV VGQVVETMKG INDASRKISD 

       370        380        390        400        410        420 
IISVIDGIAF QTNILALNAA VEAARAGEQG RGFAVVASEV RSLAGRSADA AKEIKILINT 

       430        440        450        460        470        480 
SVERVAQGTT LVDQAGVTMT EVVSSIKRVT DLMGEISAAS SEQSQGVAQV GEAVTQMDQA 

       490        500        510        520        530        540 
TQQNAALVEE MAAAASSLNS QAQDLVQTVA VFNLGANEAH QGSALASRSI RSQQTSTVGY 

       550 
KSAERRSLAA PA 

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References

[1]"Complete sequence of chromosome of Rhodoferax ferrireducens DSM 15236."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Kiss H., Schmutz J., Larimer F., Land M. expand/collapse author list , Kyrpides N., Ivanova N., Richardson P.
Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-621 / DSM 15236 / T118.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000267 Genomic DNA. Translation: ABD68672.1.
RefSeqYP_522203.1. NC_007908.1.

3D structure databases

ProteinModelPortalQ21ZY1.
SMRQ21ZY1. Positions 291-514.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING338969.Rfer_0925.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABD68672; ABD68672; Rfer_0925.
GeneID3963679.
KEGGrfr:Rfer_0925.
PATRIC23234377. VBIRhoFer131161_1213.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000148074.
OMAKERHISE.
OrthoDBEOG6G4VQG.

Enzyme and pathway databases

BioCycAFER338969:GHU9-928-MONOMER.

Family and domain databases

InterProIPR024478. 4HB_MCP.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF12729. 4HB_MCP_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ21ZY1_ALBFT
AccessionPrimary (citable) accession number: Q21ZY1
Entry history
Integrated into UniProtKB/TrEMBL: April 18, 2006
Last sequence update: April 18, 2006
Last modified: June 11, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)