Rfer_0990

Functionⁱ

GO - Molecular functionⁱ

signal transducer activity Source: InterPro

Complete GO annotation...

GO - Biological processⁱ

chemotaxis Source: InterPro

Complete GO annotation...

Keywordsⁱ

Molecular function	TransducerPROSITE-ProRule annotation

Molecular function

TransducerPROSITE-ProRule annotation

Names & Taxonomyⁱ

Protein namesⁱ	Submitted name: Methyl-accepting chemotaxis sensory transducerImported
Gene namesⁱ	Ordered Locus Names:Rfer_0990Imported
Organismⁱ	Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118) (Albidiferax ferrireducens)Imported
Taxonomic identifierⁱ	338969 [NCBI]
Taxonomic lineageⁱ	cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Comamonadaceae › Rhodoferax › Rhodoferax ferrireducens
Proteomesⁱ	UP000008332 Componentⁱ: Chromosome

Subcellular locationⁱ

Topology

Feature key	Position(s)	DescriptionActions	Graphical view	Length
Transmembraneⁱ	185 – 205	HelicalSequence analysisAdd BLAST		21

GO - Cellular componentⁱ

integral component of membrane Source: UniProtKB-KW

Complete GO annotation...

Keywords - Cellular componentⁱ

Membrane

Interactionⁱ

Protein-protein interaction databases

STRINGⁱ	338969.Rfer_0990.

STRINGⁱ

338969.Rfer_0990.

Structureⁱ

3D structure databases

ProteinModelPortalⁱ	Q21ZR9.
ModBaseⁱ	Search...
MobiDBⁱ	Search...

Family & Domainsⁱ

Domains and Repeats

Feature key	Position(s)	DescriptionActions	Graphical view	Length
Domainⁱ	209 – 261	HAMPInterPro annotationAdd BLAST		53
Domainⁱ	266 – 495	Methyl-accepting transducerInterPro annotationAdd BLAST		230

Coiled coil

Feature key	Position(s)	DescriptionActions	Graphical view	Length
Coiled coilⁱ	285 – 322	Sequence analysisAdd BLAST		38

Keywords - Domainⁱ

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGⁱ	ENOG4105C8Q. Bacteria. COG0840. LUCA.
HOGENOMⁱ	HOG000148074.
OMAⁱ	THERMVA.
Database of Orthologous Groups More...OrthoDBⁱ	POG091H0QRR.

Family and domain databases

Conserved Domains Database More...CDDⁱ	cd06225. HAMP. 1 hit.
InterProⁱ	View protein in InterPro IPR024478. 4HB_MCP. IPR004090. Chemotax_Me-accpt_rcpt. IPR003660. HAMP_dom. IPR004089. MCPsignal_dom.
Pfam protein domain database More...Pfamⁱ	View protein in Pfam PF12729. 4HB_MCP_1. 1 hit. PF00672. HAMP. 1 hit. PF00015. MCPsignal. 1 hit.
PRINTSⁱ	PR00260. CHEMTRNSDUCR.
SMARTⁱ	View protein in SMART SM00304. HAMP. 1 hit. SM00283. MA. 1 hit.
PROSITEⁱ	View protein in PROSITE PS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit. PS50885. HAMP. 1 hit.

Sequenceⁱ

Sequence statusⁱ: Complete.

Q21ZR9-1 [UniParc]FASTA Add to basket

« Hide

        10         20         30         40         50
MNNLKISTRL ALGFAVIIAV FLLLAGVTAW RVNMVSEAST RMERSAELLQ 
        60         70         80         90        100
LAGNWQGDVR QNSARSLAVG YSEGGTMLDF FKEAMAATTR GTTETQKAFL 
       110        120        130        140        150
AKVQDSESRK RAENVGEVRK TWIATRDQVN VLKAAGDDAG GRALVEKKFL 
       160        170        180        190        200
PITDDYIRAT QALVDGEAAH VHAAQQEVKE MFQQLYLLGA VLLVLTLAAA 
       210        220        230        240        250
VFIGWRLSRS ISSRVDAARL AAQRIGEGDL SQPLSAAGKD EIGQLLQALS 
       260        270        280        290        300
TMQDNLSRVV SNVRQGSESV ATASAEIAQG NQDLSARTES QASALEETAA 
       310        320        330        340        350
SMEELSSTVK QNADNAKQAN QLAQSASSVA IQGGEVVAQV VDTMKGINTS 
       360        370        380        390        400
SQRISDIISV IDGIAFQTNI LALNAAVEAA RAGEQGRGFA VVASEVRSLA 
       410        420        430        440        450
GRSADAAKEI KNLINDSVER VEQGTALVGQ AGATMTEVVS SIRRVTDIMG 
       460        470        480        490        500
EISAASSEQS AGVSQVGEAV TQMDQATQQN AALVEEMAAA ASSLKSQAQD 
       510        520        530        540 
LVGTVAVFKL AQGQEGFASS SPRAAAPANH SAPKQLSPAR AA

Length:542

Mass (Da):56,846

Last modified:April 18, 2006 - v1

Checksum:ⁱ869DA16D8C10582B

GO

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	CP000267 Genomic DNA. Translation: ABD68734.1.
NCBI Reference Sequences More...RefSeqⁱ	WP_011463304.1. NC_007908.1.

Genome annotation databases

EnsemblBacteriaⁱ	ABD68734; ABD68734; Rfer_0990.
KEGGⁱ	rfr:Rfer_0990.

Similar proteinsⁱ

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:

100%	UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%	UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%	UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Cross-referencesⁱ

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	CP000267 Genomic DNA. Translation: ABD68734.1.
NCBI Reference Sequences More...RefSeqⁱ	WP_011463304.1. NC_007908.1.

3D structure databases

ProteinModelPortalⁱ	Q21ZR9.
ModBaseⁱ	Search...
MobiDBⁱ	Search...

Protein-protein interaction databases

STRINGⁱ	338969.Rfer_0990.

STRINGⁱ

338969.Rfer_0990.

Protocols and materials databases

Structural Biology Knowledgebase	Search...

Structural Biology Knowledgebase

Search...

Genome annotation databases

EnsemblBacteriaⁱ	ABD68734; ABD68734; Rfer_0990.
KEGGⁱ	rfr:Rfer_0990.

Phylogenomic databases

eggNOGⁱ	ENOG4105C8Q. Bacteria. COG0840. LUCA.
HOGENOMⁱ	HOG000148074.
OMAⁱ	THERMVA.
Database of Orthologous Groups More...OrthoDBⁱ	POG091H0QRR.

Family and domain databases

Conserved Domains Database More...CDDⁱ	cd06225. HAMP. 1 hit.
InterProⁱ	View protein in InterPro IPR024478. 4HB_MCP. IPR004090. Chemotax_Me-accpt_rcpt. IPR003660. HAMP_dom. IPR004089. MCPsignal_dom.
Pfam protein domain database More...Pfamⁱ	View protein in Pfam PF12729. 4HB_MCP_1. 1 hit. PF00672. HAMP. 1 hit. PF00015. MCPsignal. 1 hit.
PRINTSⁱ	PR00260. CHEMTRNSDUCR.
SMARTⁱ	View protein in SMART SM00304. HAMP. 1 hit. SM00283. MA. 1 hit.
PROSITEⁱ	View protein in PROSITE PS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit. PS50885. HAMP. 1 hit.
ProtoNetⁱ	Search...

Entry informationⁱ

Entry nameⁱ	Q21ZR9_RHOFT
Accessionⁱ	Q21ZR9Primary (citable) accession number: Q21ZR9
Entry historyⁱ	Integrated into UniProtKB/TrEMBL:	April 18, 2006
	Last sequence update:	April 18, 2006
	Last modified:	June 7, 2017
	This is version 63 of the entry and version 1 of the sequence. See complete history.
Entry statusⁱ	Unreviewed (UniProtKB/TrEMBL)

Miscellaneousⁱ

Keywords - Technical termⁱ

Complete proteome, Reference proteomeImported

UniProtKB - Q21ZR9 (Q21ZR9_RHOFT)

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Methyl-accepting chemotaxis sensory transducer

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Functionⁱ

GO - Molecular functionⁱ

GO - Biological processⁱ

Keywordsⁱ

Names & Taxonomyⁱ

Subcellular locationⁱ

Topology

GO - Cellular componentⁱ

Keywords - Cellular componentⁱ

Interactionⁱ

Protein-protein interaction databases

Structureⁱ

3D structure databases

Family & Domainsⁱ

Domains and Repeats

Coiled coil

Keywords - Domainⁱ

Phylogenomic databases

Family and domain databases

Sequenceⁱ

Sequence databases

Genome annotation databases

Similar proteinsⁱ

Cross-referencesⁱ

Sequence databases

3D structure databases

Protein-protein interaction databases

Protocols and materials databases

Genome annotation databases

Phylogenomic databases

Family and domain databases

Entry informationⁱ

Miscellaneousⁱ

Keywords - Technical termⁱ

UniProtKB

UniParc

Help

UniRef

Proteomes

Annotation systems

Supporting data

UniProtKB - Q21ZR9 (Q21ZR9_RHOFT)

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Methyl-accepting chemotaxis sensory transducer

Rfer_0990

Select a section on the left to see content.

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Topology

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Cellular componenti

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Coiled coil

Phylogenomic databases

Family and domain databases

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including length and molecular weight.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

Sequence databases

Genome annotation databases

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

3D structure databases

Protein-protein interaction databases

Protocols and materials databases

Genome annotation databases

Phylogenomic databases

Family and domain databases

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Functionⁱ

GO - Molecular functionⁱ

GO - Biological processⁱ

Names & Taxonomyⁱ

Subcellular locationⁱ

GO - Cellular componentⁱ

Interactionⁱ

Structureⁱ

Family & Domainsⁱ

Sequenceⁱ

Cross-referencesⁱ

Entry informationⁱ

Miscellaneousⁱ