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UniProtKB - Q21ZR9 (Q21ZR9_RHOFT)

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Protein
Submitted name:

Methyl-accepting chemotaxis sensory transducer

Gene

Rfer_0990

Organism
Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118) (Albidiferax ferrireducens)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

GO - Biological processi

Complete GO annotation...

Keywordsi

Molecular functionTransducerPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Methyl-accepting chemotaxis sensory transducerImported
Gene namesi
Ordered Locus Names:Rfer_0990Imported
OrganismiRhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118) (Albidiferax ferrireducens)Imported
Taxonomic identifieri338969 [NCBI]
Taxonomic lineageiBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Comamonadaceae › Rhodoferax ›
Proteomesi
  • UP000008332 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei185 – 205HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi338969.Rfer_0990.

Structurei

3D structure databases

ProteinModelPortaliQ21ZR9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini209 – 261HAMPInterPro annotationAdd BLAST53
Domaini266 – 495Methyl-accepting transducerInterPro annotationAdd BLAST230

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili285 – 322Sequence analysisAdd BLAST38

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4105C8Q. Bacteria.
COG0840. LUCA.
HOGENOMiHOG000148074.
OMAiTHERMVA.
OrthoDBiPOG091H0QRR.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
InterProiView protein in InterPro
IPR024478. 4HB_MCP.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
PfamiView protein in Pfam
PF12729. 4HB_MCP_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiView protein in SMART
SM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
PROSITEiView protein in PROSITE
PS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.

Sequencei

Sequence statusi: Complete.

Q21ZR9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNNLKISTRL ALGFAVIIAV FLLLAGVTAW RVNMVSEAST RMERSAELLQ 
        60         70         80         90        100
LAGNWQGDVR QNSARSLAVG YSEGGTMLDF FKEAMAATTR GTTETQKAFL 
       110        120        130        140        150
AKVQDSESRK RAENVGEVRK TWIATRDQVN VLKAAGDDAG GRALVEKKFL 
       160        170        180        190        200
PITDDYIRAT QALVDGEAAH VHAAQQEVKE MFQQLYLLGA VLLVLTLAAA 
       210        220        230        240        250
VFIGWRLSRS ISSRVDAARL AAQRIGEGDL SQPLSAAGKD EIGQLLQALS 
       260        270        280        290        300
TMQDNLSRVV SNVRQGSESV ATASAEIAQG NQDLSARTES QASALEETAA 
       310        320        330        340        350
SMEELSSTVK QNADNAKQAN QLAQSASSVA IQGGEVVAQV VDTMKGINTS 
       360        370        380        390        400
SQRISDIISV IDGIAFQTNI LALNAAVEAA RAGEQGRGFA VVASEVRSLA 
       410        420        430        440        450
GRSADAAKEI KNLINDSVER VEQGTALVGQ AGATMTEVVS SIRRVTDIMG 
       460        470        480        490        500
EISAASSEQS AGVSQVGEAV TQMDQATQQN AALVEEMAAA ASSLKSQAQD 
       510        520        530        540 
LVGTVAVFKL AQGQEGFASS SPRAAAPANH SAPKQLSPAR AA
Length:542
Mass (Da):56,846
Last modified:April 18, 2006 - v1
Checksum:i869DA16D8C10582B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000267 Genomic DNA. Translation: ABD68734.1.
RefSeqiWP_011463304.1. NC_007908.1.

Genome annotation databases

EnsemblBacteriaiABD68734; ABD68734; Rfer_0990.
KEGGirfr:Rfer_0990.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000267 Genomic DNA. Translation: ABD68734.1.
RefSeqiWP_011463304.1. NC_007908.1.

3D structure databases

ProteinModelPortaliQ21ZR9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi338969.Rfer_0990.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABD68734; ABD68734; Rfer_0990.
KEGGirfr:Rfer_0990.

Phylogenomic databases

eggNOGiENOG4105C8Q. Bacteria.
COG0840. LUCA.
HOGENOMiHOG000148074.
OMAiTHERMVA.
OrthoDBiPOG091H0QRR.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
InterProiView protein in InterPro
IPR024478. 4HB_MCP.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
PfamiView protein in Pfam
PF12729. 4HB_MCP_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiView protein in SMART
SM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
PROSITEiView protein in PROSITE
PS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ21ZR9_RHOFT
AccessioniPrimary (citable) accession number: Q21ZR9
Entry historyiIntegrated into UniProtKB/TrEMBL: April 18, 2006
Last sequence update: April 18, 2006
Last modified: June 7, 2017
This is version 63 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.