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Q21ZR9 (Q21ZR9_RHOFD) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Methyl-accepting chemotaxis sensory transducer EMBL ABD68734.1
Gene names
Ordered Locus Names:Rfer_0990 EMBL ABD68734.1
OrganismRhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) [Complete proteome] [HAMAP] EMBL ABD68734.1
Taxonomic identifier338969 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Comamonadaceae › Albidiferax ›

Protein attributes

Sequence length542 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABD68734.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral to membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2626 Potential EMBL ABD68734.1
Chain27 – 542516 Potential
PRO_5000110244

Sequences

Sequence LengthMass (Da)Tools
Q21ZR9 [UniParc].

Last modified April 18, 2006. Version 1.
Checksum: 869DA16D8C10582B

FASTA54256,846
        10         20         30         40         50         60 
MNNLKISTRL ALGFAVIIAV FLLLAGVTAW RVNMVSEAST RMERSAELLQ LAGNWQGDVR 

        70         80         90        100        110        120 
QNSARSLAVG YSEGGTMLDF FKEAMAATTR GTTETQKAFL AKVQDSESRK RAENVGEVRK 

       130        140        150        160        170        180 
TWIATRDQVN VLKAAGDDAG GRALVEKKFL PITDDYIRAT QALVDGEAAH VHAAQQEVKE 

       190        200        210        220        230        240 
MFQQLYLLGA VLLVLTLAAA VFIGWRLSRS ISSRVDAARL AAQRIGEGDL SQPLSAAGKD 

       250        260        270        280        290        300 
EIGQLLQALS TMQDNLSRVV SNVRQGSESV ATASAEIAQG NQDLSARTES QASALEETAA 

       310        320        330        340        350        360 
SMEELSSTVK QNADNAKQAN QLAQSASSVA IQGGEVVAQV VDTMKGINTS SQRISDIISV 

       370        380        390        400        410        420 
IDGIAFQTNI LALNAAVEAA RAGEQGRGFA VVASEVRSLA GRSADAAKEI KNLINDSVER 

       430        440        450        460        470        480 
VEQGTALVGQ AGATMTEVVS SIRRVTDIMG EISAASSEQS AGVSQVGEAV TQMDQATQQN 

       490        500        510        520        530        540 
AALVEEMAAA ASSLKSQAQD LVGTVAVFKL AQGQEGFASS SPRAAAPANH SAPKQLSPAR 


AA

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References

[1]"Complete sequence of chromosome of Rhodoferax ferrireducens DSM 15236."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Kiss H., Schmutz J., Larimer F., Land M. expand/collapse author list , Kyrpides N., Ivanova N., Richardson P.
Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 15236 / ATCC BAA-621 / T118.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000267 Genomic DNA. Translation: ABD68734.1.
RefSeqYP_522265.1. NC_007908.1.

3D structure databases

ProteinModelPortalQ21ZR9.
SMRQ21ZR9. Positions 287-512.
ModBaseSearch...

Protein-protein interaction databases

STRING338969.Rfer_0990.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABD68734; ABD68734; Rfer_0990.
GeneID3963705.
KEGGrfr:Rfer_0990.
PATRIC23234517. VBIRhoFer131161_1283.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000148074.
OMANDATHEI.

Enzyme and pathway databases

BioCycAFER338969:GHU9-993-MONOMER.

Family and domain databases

InterProIPR024478. 4HB_MCP.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF12729. 4HB_MCP_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ21ZR9_RHOFD
AccessionPrimary (citable) accession number: Q21ZR9
Entry history
Integrated into UniProtKB/TrEMBL: April 18, 2006
Last sequence update: April 18, 2006
Last modified: May 29, 2013
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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