Rfer_0990

Functionⁱ

GO - Molecular functionⁱ

signal transducer activity Source: InterPro

GO - Biological processⁱ

chemotaxis Source: InterPro

Complete GO annotation...

Enzyme and pathway databases

BioCycⁱ	AFER338969:GHU9-993-MONOMER.

BioCycⁱ

AFER338969:GHU9-993-MONOMER.

Names & Taxonomyⁱ

Protein namesⁱ	Submitted name: Methyl-accepting chemotaxis sensory transducerImported Automatic assertion inferred from database entriesⁱ EMBL:ABD68734.1
Gene namesⁱ	Ordered Locus Names:Rfer_0990Imported Automatic assertion inferred from database entriesⁱ EMBL:ABD68734.1
Organismⁱ	Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118) (Albidiferax ferrireducens)Imported Automatic assertion inferred from database entriesⁱ EMBL:ABD68734.1 Proteomes:UP000008332
Taxonomic identifierⁱ	338969 [NCBI]
Taxonomic lineageⁱ	cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Comamonadaceae › Rhodoferax › Rhodoferax ferrireducens
Proteomesⁱ	UP000008332: Chromosome

Subcellular locationⁱ

GO - Cellular componentⁱ

integral component of membrane Source: InterPro

Complete GO annotation...

PTM / Processingⁱ

Molecule processing

Feature key	Position(s)	Length	Description	Graphical view	Feature identifier	Actions
Signal peptideⁱ	1 – 26	26	PotentialImported Automatic assertion inferred from database entriesⁱ EMBL:ABD68734.1			Add BLAST
Chainⁱ	27 – 542	516	PotentialImported Automatic assertion inferred from database entriesⁱ EMBL:ABD68734.1		PRO_5000110244	Add BLAST

Interactionⁱ

Protein-protein interaction databases

STRINGⁱ	338969.Rfer_0990.

STRINGⁱ

338969.Rfer_0990.

Structureⁱ

3D structure databases

ProteinModelPortalⁱ	Q21ZR9.
SMRⁱ	Q21ZR9. Positions 287-512.
ModBaseⁱ	Search...
MobiDBⁱ	Search...

Family & Domainsⁱ

Keywords - Domainⁱ

SignalImported

Phylogenomic databases

eggNOGⁱ	COG0840.
HOGENOMⁱ	HOG000148074.
OMAⁱ	KTWIATR.
OrthoDBⁱ	EOG6G4VQG.

Family and domain databases

InterProⁱ	IPR024478. 4HB_MCP. IPR004090. Chemotax_Me-accpt_rcpt. IPR003660. HAMP_linker_domain. IPR004089. MCPsignal_dom. [Graphical view]
Pfamⁱ	PF12729. 4HB_MCP_1. 1 hit. PF00672. HAMP. 1 hit. PF00015. MCPsignal. 1 hit. [Graphical view]
PRINTSⁱ	PR00260. CHEMTRNSDUCR.
SMARTⁱ	SM00304. HAMP. 1 hit. SM00283. MA. 1 hit. [Graphical view]
PROSITEⁱ	PS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit. PS50885. HAMP. 1 hit. [Graphical view]

Sequenceⁱ

Sequence statusⁱ: Complete.

Sequence processingⁱ: The displayed sequence is further processed into a mature form.

Q21ZR9-1 [UniParc]FASTA Add to Basket

« Hide

        10         20         30         40         50
MNNLKISTRL ALGFAVIIAV FLLLAGVTAW RVNMVSEAST RMERSAELLQ 
        60         70         80         90        100
LAGNWQGDVR QNSARSLAVG YSEGGTMLDF FKEAMAATTR GTTETQKAFL 
       110        120        130        140        150
AKVQDSESRK RAENVGEVRK TWIATRDQVN VLKAAGDDAG GRALVEKKFL 
       160        170        180        190        200
PITDDYIRAT QALVDGEAAH VHAAQQEVKE MFQQLYLLGA VLLVLTLAAA 
       210        220        230        240        250
VFIGWRLSRS ISSRVDAARL AAQRIGEGDL SQPLSAAGKD EIGQLLQALS 
       260        270        280        290        300
TMQDNLSRVV SNVRQGSESV ATASAEIAQG NQDLSARTES QASALEETAA 
       310        320        330        340        350
SMEELSSTVK QNADNAKQAN QLAQSASSVA IQGGEVVAQV VDTMKGINTS 
       360        370        380        390        400
SQRISDIISV IDGIAFQTNI LALNAAVEAA RAGEQGRGFA VVASEVRSLA 
       410        420        430        440        450
GRSADAAKEI KNLINDSVER VEQGTALVGQ AGATMTEVVS SIRRVTDIMG 
       460        470        480        490        500
EISAASSEQS AGVSQVGEAV TQMDQATQQN AALVEEMAAA ASSLKSQAQD 
       510        520        530        540 
LVGTVAVFKL AQGQEGFASS SPRAAAPANH SAPKQLSPAR AA

Length:542

Mass (Da):56,846

Last modified:April 18, 2006 - v1

Checksum:ⁱ869DA16D8C10582B

GO

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	CP000267 Genomic DNA. Translation: ABD68734.1.
RefSeqⁱ	WP_011463304.1. NC_007908.1. YP_522265.1. NC_007908.1.

Genome annotation databases

EnsemblBacteriaⁱ	ABD68734; ABD68734; Rfer_0990.
GeneIDⁱ	3963705.
KEGGⁱ	rfr:Rfer_0990.
PATRICⁱ	23234517. VBIRhoFer131161_1283.

Cross-referencesⁱ

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	CP000267 Genomic DNA. Translation: ABD68734.1.
RefSeqⁱ	WP_011463304.1. NC_007908.1. YP_522265.1. NC_007908.1.

3D structure databases

ProteinModelPortalⁱ	Q21ZR9.
SMRⁱ	Q21ZR9. Positions 287-512.
ModBaseⁱ	Search...
MobiDBⁱ	Search...

Protein-protein interaction databases

STRINGⁱ	338969.Rfer_0990.

STRINGⁱ

338969.Rfer_0990.

Protocols and materials databases

Structural Biology Knowledgebase	Search...

Structural Biology Knowledgebase

Search...

Genome annotation databases

EnsemblBacteriaⁱ	ABD68734; ABD68734; Rfer_0990.
GeneIDⁱ	3963705.
KEGGⁱ	rfr:Rfer_0990.
PATRICⁱ	23234517. VBIRhoFer131161_1283.

Phylogenomic databases

eggNOGⁱ	COG0840.
HOGENOMⁱ	HOG000148074.
OMAⁱ	KTWIATR.
OrthoDBⁱ	EOG6G4VQG.

Enzyme and pathway databases

BioCycⁱ	AFER338969:GHU9-993-MONOMER.

BioCycⁱ

AFER338969:GHU9-993-MONOMER.

Family and domain databases

InterProⁱ	IPR024478. 4HB_MCP. IPR004090. Chemotax_Me-accpt_rcpt. IPR003660. HAMP_linker_domain. IPR004089. MCPsignal_dom. [Graphical view]
Pfamⁱ	PF12729. 4HB_MCP_1. 1 hit. PF00672. HAMP. 1 hit. PF00015. MCPsignal. 1 hit. [Graphical view]
PRINTSⁱ	PR00260. CHEMTRNSDUCR.
SMARTⁱ	SM00304. HAMP. 1 hit. SM00283. MA. 1 hit. [Graphical view]
PROSITEⁱ	PS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit. PS50885. HAMP. 1 hit. [Graphical view]
ProtoNetⁱ	Search...

Publicationsⁱ

"Complete sequence of chromosome of Rhodoferax ferrireducens DSM 15236."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Kiss H., Schmutz J., Larimer F., Land M.
, Kyrpides N., Ivanova N., Richardson P.
Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain:
ATCC BAA-621 / DSM 15236 / T118
Imported
Automatic assertion inferred from database entriesⁱ
- Proteomes:UP000008332
.

Entry informationⁱ

Entry nameⁱ

Q21ZR9_RHOFT

Accessionⁱ

Primary (citable) accession number: Q21ZR9

Entry historyⁱ

Integrated into UniProtKB/TrEMBL:	April 18, 2006
Last sequence update:	April 18, 2006
Last modified:	January 7, 2015
This is version 50 of the entry and version 1 of the sequence. [Complete history]

Entry statusⁱ

Unreviewed (UniProtKB/TrEMBL)

Miscellaneousⁱ

Keywords - Technical termⁱ

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsⁱ

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:

100%	UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%	UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%	UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

UniProtKB

Proteomes

UniRef

Supporting data

UniParc

Help

Q21ZR9 - Q21ZR9_RHOFT

UniProt

Q21ZR9 - Q21ZR9_RHOFT

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Methyl-accepting chemotaxis sensory transducer

Select a section on the left to see content.

<p>Provides any useful information about the protein, mostly biological knowledge.</p><p><a href='../manual/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:</p><p><a href='../manual/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:</p><p><a href='../manual/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

Enzyme and pathway databases

<p>Provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.</p><p><a href='../manual/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>Provides information on the location and the topology of the mature protein in the cell.</p><p><a href='../manual/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:</p><p><a href='../manual/gene_ontology' target='_top'>More...</a></p>GO - Cellular componenti

<p>Describes post-translational modifications (PTMs) and/or processing events.</p><p><a href='../manual/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

<p>Provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.</p><p><a href='../manual/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

<p>Provides information on the tertiary structure of a protein.</p><p><a href='../manual/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

<p>Provides information on sequence similarities with other proteins and the domain(s) present in a protein.</p><p><a href='../manual/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Phylogenomic databases

Family and domain databases

<p>Displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including length and molecular weight.</p><p><a href='../manual/sequences_section' target='_top'>More...</a></p>Sequencei

Sequence databases

Genome annotation databases

<p>Is used to point to information related to entries and found in data collections other than UniProtKB.</p><p><a href='../manual/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

3D structure databases

Protein-protein interaction databases

Protocols and materials databases

Genome annotation databases

Phylogenomic databases

Enzyme and pathway databases

Family and domain databases

<p>Contains the literature citations that are the sources of data used to annotate the entry. Each reference is numbered and contains several subsections allowing a precise description of a given citation.</p><p><a href='../manual/publications_section' target='_top'>More...</a></p>Publicationsi

<p>Provides general information on the entry.</p><p><a href='../manual/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>Contains any relevant information that doesn’t fit in any other defined sections</p><p><a href='../manual/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

External Data

Functionⁱ

GO - Molecular functionⁱ

GO - Biological processⁱ

Names & Taxonomyⁱ

Subcellular locationⁱ

GO - Cellular componentⁱ

PTM / Processingⁱ

Interactionⁱ

Structureⁱ

Family & Domainsⁱ

Sequenceⁱ

Cross-referencesⁱ

Publicationsⁱ

Entry informationⁱ

Miscellaneousⁱ