Q21Z32 (Q21Z32_RHOFD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
GDP-mannose 4,6-dehydratase EMBL ABD68971.1

Gene names

Ordered Locus Names:

Rfer_1237

Organism

Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) [Complete proteome] [HAMAP]

Taxonomic identifier

338969 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Comamonadaceae › Albidiferax

Protein attributes

Sequence length	367 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	GDP-mannose metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular function	GDP-mannose 4,6-dehydratase activity Inferred from electronic annotation. Source: InterPro coenzyme binding Inferred from electronic annotation. Source: InterPro nucleotide binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q21Z32 [UniParc]. Last modified April 18, 2006. Version 1. Checksum: F076C711DB02B56A	FASTA	367	41,605
	10 20 30 40 50 60 MTQKTALITG ITGQDGSYLA EFLLEKGYIV HGIKRRASSF NTQRVDHIYQ DPHVNNAHFK 70 80 90 100 110 120 LHYGDLSDTS NLVRIVQETQ PDEIYNLGAQ SHVAVSFESP EYTADVDGMG TLRILEAIRI 130 140 150 160 170 180 LGLEKKTRYY QASTSELYGL VQETPQRETT PFYPRSPYAV AKLYAYWITV NYREAYGMYA 190 200 210 220 230 240 CNGIMFNHES PRRGETFVTR KITRGLANIS QGLEDCLFMG NIDALRDWGH AKDYVRMQWM 250 260 270 280 290 300 MLQQDKPDDF VIATGVQYSV RSFLEWTATA LGMQIRWEGS GVEEVGYAVV PGASREAAIV 310 320 330 340 350 360 RIDPRYFRPT EVETLLGDPT KAKQKLGWVP EITAQEMCAE MVAHDLVEAK KHALLKQNGY SVNVCIE

References

[1]

"Complete sequence of chromosome of Rhodoferax ferrireducens DSM 15236." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Kiss H., Schmutz J., Larimer F., Land M. , Kyrpides N., Ivanova N., Richardson P. Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000267 Genomic DNA. Translation: ABD68971.1.
RefSeq	YP_522502.1. NC_007908.1.
3D structure databases
ProteinModelPortal	Q21Z32.
SMR	Q21Z32. Positions 4-353.
ModBase	Search...
Protein-protein interaction databases
STRING	Q21Z32.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3961227.
GenomeReviews	Gene locus Rfer_1237 in contig CP000267_GR.
KEGG	rfr:Rfer_1237.
NMPDR	fig|338969.3.peg.3506.
PATRIC	23235031. VBIRhoFer131161_1540.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1089.
HOGENOM	HBG755066.
OMA	TQRVDHI.
PhylomeDB	Q21Z32.
ProtClustDB	CLSK721669.
Enzyme and pathway databases
BioCyc	RFER338969:RFER_1237-MONOMER.
Family and domain databases
InterPro	IPR001509. Epimerase_deHydtase. IPR006368. GDP_Man_deHydtase. IPR016040. NAD(P)-bd_dom. [Graphical view]
Gene3D	G3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
KO	K01711.
PANTHER	PTHR10366:SF32. GDP_mann_dehyd. 1 hit.
Pfam	PF01370. Epimerase. 1 hit. [Graphical view]
TIGRFAMs	TIGR01472. Gmd. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q21Z32_RHOFD

Accession

Primary (citable) accession number: Q21Z32

Entry history

Integrated into UniProtKB/TrEMBL:	April 18, 2006
Last sequence update:	April 18, 2006
Last modified:	December 14, 2011
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)