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Q21WU9 (Q21WU9_RHOFD) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Rfer_2029 EMBL ABD69754.1
OrganismRhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) [Complete proteome] [HAMAP] EMBL ABD69754.1
Taxonomic identifier338969 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeAlbidiferax

Protein attributes

Sequence length529 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABD69754.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 4747 Potential EMBL ABD69754.1
Chain48 – 529482 Potential EMBL ABD69754.1
PRO_5000110433

Sequences

Sequence LengthMass (Da)Tools
Q21WU9 [UniParc].

Last modified April 18, 2006. Version 1.
Checksum: 1ACCDBBC84C1D9D6

FASTA52955,875
        10         20         30         40         50         60 
MTMSTVLSKF NGAWSFSRQI RVVLSLVLAV ALLGSALGVW SLQRVANETS RMVDDAMATE 

        70         80         90        100        110        120 
RLAVDLYRHL ALNVARSKAF ALSSEPQVAD VLTPEINQTS TVVDELLRQL GSRLSSPDDQ 

       130        140        150        160        170        180 
LMLGHMLQAN REFLRARQEL TLARDGGVTA NIEQVYAKRF SPAAQALLEA VARLRDSRQA 

       190        200        210        220        230        240 
RIDASVVEIA GLSRSAQWGL VLFGCGALLL GGLLSAWLVR AITRPIHQAV DAADRVAALD 

       250        260        270        280        290        300 
LSDPIDGHDR DEGGRLLAAL SRMQSSLHTL VSEVQGASHG VAEGATQIAT GNLDFSSRTE 

       310        320        330        340        350        360 
LAASFLQQTA AAVEQIAATL HQSLAAASRG EALARSAAVE ATAGRKAMTE VMQTMSDISQ 

       370        380        390        400        410        420 
SSHQIAQITA VIDGIAFQTN ILALNAAVEA ARAGEHGRGF AVVAAEVRAL ANRSAVAAQE 

       430        440        450        460        470        480 
IRSLIGVSVD KAKLGTLNVR QARDTMSAID DAVARVVQVI GDISTGTREQ SAGMASINTA 

       490        500        510        520 
LSRLDQMTQQ NAAVVEQSAA AAQSLQAQAG DLRDMAGQFR LPALALALR 

« Hide

References

[1]"Complete sequence of chromosome of Rhodoferax ferrireducens DSM 15236."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Kiss H., Schmutz J., Larimer F., Land M. expand/collapse author list , Kyrpides N., Ivanova N., Richardson P.
Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 15236 / ATCC BAA-621 / T118.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000267 Genomic DNA. Translation: ABD69754.1.
RefSeqYP_523285.1. NC_007908.1.

3D structure databases

ProteinModelPortalQ21WU9.
SMRQ21WU9. Positions 300-522.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING338969.Rfer_2029.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABD69754; ABD69754; Rfer_2029.
GeneID3963167.
KEGGrfr:Rfer_2029.
PATRIC23236705. VBIRhoFer131161_2362.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000148074.
OMAWANRISK.
OrthoDBEOG6G4VQG.
ProtClustDBCLSK721976.

Enzyme and pathway databases

BioCycAFER338969:GHU9-2049-MONOMER.

Family and domain databases

InterProIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ21WU9_RHOFD
AccessionPrimary (citable) accession number: Q21WU9
Entry history
Integrated into UniProtKB/TrEMBL: April 18, 2006
Last sequence update: April 18, 2006
Last modified: February 19, 2014
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)