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Q21WA5 (Q21WA5_RHOFD) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 49. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Rfer_2225 EMBL ABD69948.1
OrganismRhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) [Complete proteome] [HAMAP] EMBL ABD69948.1
Taxonomic identifier338969 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeAlbidiferax

Protein attributes

Sequence length583 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABD69948.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3838 Potential EMBL ABD69948.1
Chain39 – 583545 Potential EMBL ABD69948.1
PRO_5000110469

Sequences

Sequence LengthMass (Da)Tools
Q21WA5 [UniParc].

Last modified April 18, 2006. Version 1.
Checksum: F5CE577EC8CC71DD

FASTA58361,254
        10         20         30         40         50         60 
MKIFASMKIG KRLGFGFAVV LAFAVLITGI GVWQLNALGN ATREMTREPL AKERLISDWS 

        70         80         90        100        110        120 
RNINVAVIRT TAVAKSSDPS LVPFFSTNAA EITKSTSALL KQIEPLLSSQ EEKDLFSKVS 

       130        140        150        160        170        180 
DVRKAYLSSR DQVTKLKADG QADEANRLLE STYIPAADNY MKLVSEFLGL QRKNLDAKAV 

       190        200        210        220        230        240 
EISGIETTSR NYLVALAALV LTFGVICAWL LTVGITGPLT NAVAVARRVA DGDLATDIQT 

       250        260        270        280        290        300 
EGKDETAQLL QALSAMKDNL ARIVGNVRQG SEGVATASAE IAQGNNDLSA RTEQQASALE 

       310        320        330        340        350        360 
ETAASMEELS ATVRQNADNA RQANQLAQSA STVAIKGGEV VSRVVETMKG INDSSKKISD 

       370        380        390        400        410        420 
IIQVIDGIAF QTNILALNAA VEAARAGEQG RGFAVVASEV RSLAGRSADA AKEIKGLIND 

       430        440        450        460        470        480 
SVQRVEQGST LVDQAGVTMT EVVSSIRRVT DIMGEISAAS TEQSQGVAQV SEAVTQMDQV 

       490        500        510        520        530        540 
TQQNAALVEE MAAAASSLKS QAQELVGTVS VFKLSQSQGA GLPDSSAPQR TRSVRSAPAP 

       550        560        570        580 
APAPAARKLG NTPAKPAIRA KPDSLAAPAA ATPKAGGDDW ESF 

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References

[1]"Complete sequence of chromosome of Rhodoferax ferrireducens DSM 15236."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Kiss H., Schmutz J., Larimer F., Land M. expand/collapse author list , Kyrpides N., Ivanova N., Richardson P.
Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 15236 / ATCC BAA-621 / T118.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000267 Genomic DNA. Translation: ABD69948.1.
RefSeqYP_523479.1. NC_007908.1.

3D structure databases

ProteinModelPortalQ21WA5.
SMRQ21WA5. Positions 291-516.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING338969.Rfer_2225.

Proteomic databases

PRIDEQ21WA5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABD69948; ABD69948; Rfer_2225.
GeneID3961956.
KEGGrfr:Rfer_2225.
PATRIC23237121. VBIRhoFer131161_2568.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000148074.
KOK03406.
OMARIFNERF.
OrthoDBEOG6GN790.
ProtClustDBCLSK721613.

Enzyme and pathway databases

BioCycAFER338969:GHU9-2247-MONOMER.

Family and domain databases

InterProIPR024478. 4HB_MCP.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF12729. 4HB_MCP_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ21WA5_RHOFD
AccessionPrimary (citable) accession number: Q21WA5
Entry history
Integrated into UniProtKB/TrEMBL: April 18, 2006
Last sequence update: April 18, 2006
Last modified: February 19, 2014
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)