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Protein

Putative thymidine phosphorylase

Gene

Rfer_2241

Organism
Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118) (Albidiferax ferrireducens)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

Thymidine + phosphate = thymine + 2-deoxy-alpha-D-ribose 1-phosphate.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosyltransferase, Transferase

Enzyme and pathway databases

BioCyciAFER338969:GHU9-2224-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Putative thymidine phosphorylaseUniRule annotation (EC:2.4.2.4UniRule annotation)
Alternative name(s):
TdRPaseUniRule annotation
Gene namesi
Ordered Locus Names:Rfer_2241
OrganismiRhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118) (Albidiferax ferrireducens)
Taxonomic identifieri338969 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeRhodoferax
Proteomesi
  • UP000008332 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003147121 – 522Putative thymidine phosphorylaseAdd BLAST522

Interactioni

Protein-protein interaction databases

STRINGi338969.Rfer_2241

Structurei

3D structure databases

ProteinModelPortaliQ21W90
SMRiQ21W90
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. Type 2 subfamily.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CMW Bacteria
COG0213 LUCA
HOGENOMiHOG000252767
KOiK00758
OMAiQMVASIM
OrthoDBiPOG091H02BC

Family and domain databases

Gene3Di3.40.1030.10, 2 hits
3.90.1170.30, 1 hit
HAMAPiMF_00703 Thymid_phosp_2, 1 hit
InterProiView protein in InterPro
IPR000312 Glycosyl_Trfase_fam3
IPR017459 Glycosyl_Trfase_fam3_N_dom
IPR036320 Glycosyl_Trfase_fam3_N_dom)sf
IPR035902 Nuc_phospho_transferase
IPR036566 PYNP-like_C_sf
IPR013102 PYNP_C
IPR017872 Pyrmidine_PPase_CS
IPR028579 Thym_Pase_Put
IPR013466 Thymidine/AMP_Pase
IPR000053 Thymidine/pyrmidine_PPase
PANTHERiPTHR10515 PTHR10515, 1 hit
PfamiView protein in Pfam
PF02885 Glycos_trans_3N, 1 hit
PF00591 Glycos_transf_3, 1 hit
PF07831 PYNP_C, 1 hit
PIRSFiPIRSF000478 TP_PyNP, 1 hit
SMARTiView protein in SMART
SM00941 PYNP_C, 1 hit
SUPFAMiSSF47648 SSF47648, 1 hit
SSF52418 SSF52418, 1 hit
SSF54680 SSF54680, 1 hit
TIGRFAMsiTIGR02645 ARCH_P_rylase, 1 hit
PROSITEiView protein in PROSITE
PS00647 THYMID_PHOSPHORYLASE, 1 hit

Sequencei

Sequence statusi: Complete.

Q21W90-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRKHTDKPQL ASKLVLRRVA IDTYRENVAY LHRDCAVYRA EGFQALSKVE
60 70 80 90 100
VRANGRHILA TLNVVDDPNI VACNELGLSE DAFAQMAVID GQPASVSQAE
110 120 130 140 150
PPQSIGALRR KLAGERLGRE DFLGIVRDIA ELHYSKIELS AFVVATNRDE
160 170 180 190 200
LDREEVYFLT EAMVASGRTL NWHEPLVVDK HCIGGIPGNR SSMLVVPIVA
210 220 230 240 250
AHGLLCPKTS SRAITSPAGT ADTMEVLAKV ELPVDQLADI VRTHRGCLAW
260 270 280 290 300
GGAAHLSPAD DVLISVERPL AIDSPGQMVA SILSKKIAAG STHLVLDIPI
310 320 330 340 350
GPSAKVRSMP EAQRLRRLFE YVAGRMHLSL DVVVTDGRQP IGNGIGPVLE
360 370 380 390 400
ARDVMRVLEN DPRAPNDLRQ KSLRLAGRLI EFDPDVRGGD GFAIARDILD
410 420 430 440 450
SGRALAKMNA IIAAQGAKPF DHNHPQLGAL TFDICASESG VVTGIDNLQV
460 470 480 490 500
ARIARLAGAP KVIGAGIDLF HKLGEAVTSG EVLYRVHAGF QSDLDFARQA
510 520
CAKSTGYTLG RAEDVPHVFT EF
Length:522
Mass (Da):56,346
Last modified:April 18, 2006 - v1
Checksum:i713D9EC0997E943B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000267 Genomic DNA Translation: ABD69963.1
RefSeqiWP_011464531.1, NC_007908.1

Genome annotation databases

EnsemblBacteriaiABD69963; ABD69963; Rfer_2241
KEGGirfr:Rfer_2241

Similar proteinsi

Entry informationi

Entry nameiTYPH_RHOFT
AccessioniPrimary (citable) accession number: Q21W90
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: April 18, 2006
Last modified: March 28, 2018
This is version 76 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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