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Protein
Submitted name:

Methyl-accepting chemotaxis sensory transducer

Gene

Rfer_2342

Organism
Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118) (Albidiferax ferrireducens)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciAFER338969:GHU9-2366-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Methyl-accepting chemotaxis sensory transducerImported
Gene namesi
Ordered Locus Names:Rfer_2342Imported
OrganismiRhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118) (Albidiferax ferrireducens)Imported
Taxonomic identifieri338969 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeRhodoferax
Proteomesi
  • UP000008332 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei23 – 4321HelicalSequence analysisAdd
BLAST
Transmembranei49 – 7325HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi338969.Rfer_2342.

Structurei

3D structure databases

ProteinModelPortaliQ21VZ4.
SMRiQ21VZ4. Positions 152-377.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini74 – 12653HAMPInterPro annotationAdd
BLAST
Domaini131 – 360230Methyl-accepting transducerInterPro annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili143 – 17028Sequence analysisAdd
BLAST

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4105C8Q. Bacteria.
COG0840. LUCA.
HOGENOMiHOG000148074.
OMAiPGWVEYD.
OrthoDBiPOG091H0QRR.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
InterProiIPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
IPR033480. sCache_2.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF17200. sCache_2. 1 hit.
[Graphical view]
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q21VZ4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIFASLLTPG LLLMRRVRIV TKLSLLAVVL MTPPILMLVH YFLTEPAGYG
60 70 80 90 100
AAWIAWLSAA CLIVSLYVLL AIYRSFALDL AQVAQAMAQM LRGDLRLNVV
110 120 130 140 150
PRGRDELADL ASAVSKMGST VSAMVANVRS NSAFVAYAGK SLASSNRELA
160 170 180 190 200
DRTEQQAANL EQTAASVEQL SSTVQENAQT AGQANAQAAG VRDLADQGAS
210 220 230 240 250
TMAQSIASVE AIQSSAKRMD EIVSVIDGLA FQTNILALNA AVEAARAGES
260 270 280 290 300
GRGFAVVASE VRLLAQRSAE SAKEIRQLIG ASSAQVAASV QSIRSAGGNI
310 320 330 340 350
TQIVSGIRDV AVNMGQISTS SAEQSAGLTE ITSAVRQLDE ITQRNAQMVE
360 370 380 390 400
QAVSQATDLE NRASTLVDAV ALFKLQQGSA EEAVELVNRA VAQRRRSASV
410 420 430 440 450
QAFVRDVTDP AQGFYDRDMY VFVLDDEGTY LSFGGNPAKV GTRVQDIPGI
460 470 480 490 500
DGQGLVDDII VQARREPGWV EYDINNPTTG RVQTKMSYVQ MVDGLYVGCG

VYRNLVVG
Length:508
Mass (Da):54,015
Last modified:April 18, 2006 - v1
Checksum:i6A84D7CAA3269E83
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000267 Genomic DNA. Translation: ABD70059.1.
RefSeqiWP_011464627.1. NC_007908.1.

Genome annotation databases

EnsemblBacteriaiABD70059; ABD70059; Rfer_2342.
KEGGirfr:Rfer_2342.
PATRICi23237361. VBIRhoFer131161_2686.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000267 Genomic DNA. Translation: ABD70059.1.
RefSeqiWP_011464627.1. NC_007908.1.

3D structure databases

ProteinModelPortaliQ21VZ4.
SMRiQ21VZ4. Positions 152-377.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi338969.Rfer_2342.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABD70059; ABD70059; Rfer_2342.
KEGGirfr:Rfer_2342.
PATRICi23237361. VBIRhoFer131161_2686.

Phylogenomic databases

eggNOGiENOG4105C8Q. Bacteria.
COG0840. LUCA.
HOGENOMiHOG000148074.
OMAiPGWVEYD.
OrthoDBiPOG091H0QRR.

Enzyme and pathway databases

BioCyciAFER338969:GHU9-2366-MONOMER.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
InterProiIPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
IPR033480. sCache_2.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF17200. sCache_2. 1 hit.
[Graphical view]
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ21VZ4_RHOFT
AccessioniPrimary (citable) accession number: Q21VZ4
Entry historyi
Integrated into UniProtKB/TrEMBL: April 18, 2006
Last sequence update: April 18, 2006
Last modified: September 7, 2016
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.