Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q21VY2 (Q21VY2_RHOFD) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:Rfer_2354 EMBL ABD70071.1
OrganismRhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) [Complete proteome] [HAMAP] EMBL ABD70071.1
Taxonomic identifier338969 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeAlbidiferax

Protein attributes

Sequence length554 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABD70071.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 4242 Potential EMBL ABD70071.1
Chain43 – 554512 Potential EMBL ABD70071.1
PRO_5000110486

Sequences

Sequence LengthMass (Da)Tools
Q21VY2 [UniParc].

Last modified April 18, 2006. Version 1.
Checksum: 5D37DB39A08C7008

FASTA55458,747
        10         20         30         40         50         60 
MQFVTFMRRF TIRFRMLGAI AMVAMALLFI GAIGVAAQLY ANSIATDLVA RDITSLTELA 

        70         80         90        100        110        120 
RLQQAMGNVR LNEKEMIIQY ENSVEAAKYK EAWTASFARL EASAKALAPL LPQDAQRAEL 

       130        140        150        160        170        180 
AQVVTGMQQF RTEFAPLAQQ LESLAFPSAQ VASATIGKLQ PIYDKANSTL TTLATGLQRA 

       190        200        210        220        230        240 
TETSQGKLQS TVNQVVWLIA GATGVLLLVF IPLTIWNMNA ICVPILKAEQ VAQDIAQGDL 

       250        260        270        280        290        300 
TDHNVDCRGN DEAARLLRSL EAMRQSLGQL VGQVRMSTDS IATASAEIAS GNQDLSVRTE 

       310        320        330        340        350        360 
QTASNLQRAA SHMDQLTHTV QQSADASRQA NQLASTAGDV AARGGSVVSQ VVSTMNDINT 

       370        380        390        400        410        420 
SSKKISDIIG VIDGIAFQTN ILALNAAVEA ARAGEQGRGF AVVASEVRSL AGRSAEAAKE 

       430        440        450        460        470        480 
IKSLIGASVE RIETGSRLVT DAGKTMTDIV NSVQRVSDII GEITGAAAEQ SQGIGEVNTA 

       490        500        510        520        530        540 
VVQLDQMTQQ NAALVEQSAA AAESLREQAQ RLAEVVGTFK IPSSGAGNPS PMLPRVQQST 

       550 
PPQLSTPSRL SLRA 

« Hide

References

[1]"Complete sequence of chromosome of Rhodoferax ferrireducens DSM 15236."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Kiss H., Schmutz J., Larimer F., Land M. expand/collapse author list , Kyrpides N., Ivanova N., Richardson P.
Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 15236 / ATCC BAA-621 / T118.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000267 Genomic DNA. Translation: ABD70071.1.
RefSeqYP_523602.1. NC_007908.1.

3D structure databases

ProteinModelPortalQ21VY2.
SMRQ21VY2. Positions 298-521.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING338969.Rfer_2354.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABD70071; ABD70071; Rfer_2354.
GeneID3961489.
KEGGrfr:Rfer_2354.
PATRIC23237387. VBIRhoFer131161_2698.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000148074.
OMAHEASERS.
OrthoDBEOG6G4VQG.
ProtClustDBCLSK951494.

Enzyme and pathway databases

BioCycAFER338969:GHU9-2379-MONOMER.

Family and domain databases

InterProIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ21VY2_RHOFD
AccessionPrimary (citable) accession number: Q21VY2
Entry history
Integrated into UniProtKB/TrEMBL: April 18, 2006
Last sequence update: April 18, 2006
Last modified: February 19, 2014
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)