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Q21VK5 (Q21VK5_RHOFD) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Rfer_2481 EMBL ABD70198.1
OrganismRhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) [Complete proteome] [HAMAP] EMBL ABD70198.1
Taxonomic identifier338969 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeAlbidiferax

Protein attributes

Sequence length579 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABD70198.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentmembrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3131 Potential EMBL ABD70198.1
Chain32 – 579548 Potential EMBL ABD70198.1
PRO_5000110509

Sequences

Sequence LengthMass (Da)Tools
Q21VK5 [UniParc].

Last modified April 18, 2006. Version 1.
Checksum: 49A8AB53FE4066B9

FASTA57960,665
        10         20         30         40         50         60 
MKLSLKLPLA FAWAQLFLFC AALFGIYSLN QSLGTFENAV AATANTNHEA QVADMALVFK 

        70         80         90        100        110        120 
TQVLEWKNVL LRGSNAEKMS THWAGFVQHE RDVAERAKKL MAALPEGESR ALVAKFAQAH 

       130        140        150        160        170        180 
TQMGENYRKG LEFFKAANMD PAGGDNSAQD MDREPLKLLE QAVARIKADN AAVLAQAAAS 

       190        200        210        220        230        240 
GRRATLISVV LMLLVCAGGI VFGILLSRSI IKQLGGEPQD AVNLAQRVAQ GDLSEENMLK 

       250        260        270        280        290        300 
AGDTSSLMAH LDLMQASLAR VVANVHRGSE GLQVASAEIA QGNQDLSART ESQASALEQT 

       310        320        330        340        350        360 
ASSMEQLSAA VKQNADSARQ ANQLALSASA VAVKGGEVVA QVVDTMKGIN DASRKISDII 

       370        380        390        400        410        420 
SVIDGIAFQT NILALNAAVE AARAGEQGRG FAVVASEVRS LAGRSAEAAK EIKSLINASV 

       430        440        450        460        470        480 
ERVEQGSTLV DQAGVTMAEV VSSIHRVTDI MGEISSASSE QALGVSQVGE AVTQMDQSTQ 

       490        500        510        520        530        540 
QNAALVEQMA AAANSLKSQA QDLVQTVAVF KLVSVDSPRR APPPAALRSN QPAPGVRQPV 

       550        560        570 
ARRALAAPSS GAALKNSAKA PAKTLAKDAP AGEADWEAF 

« Hide

References

[1]"Complete sequence of chromosome of Rhodoferax ferrireducens DSM 15236."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Kiss H., Schmutz J., Larimer F., Land M. expand/collapse author list , Kyrpides N., Ivanova N., Richardson P.
Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 15236 / ATCC BAA-621 / T118.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000267 Genomic DNA. Translation: ABD70198.1.
RefSeqYP_523729.1. NC_007908.1.

3D structure databases

ProteinModelPortalQ21VK5.
SMRQ21VK5. Positions 289-512.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING338969.Rfer_2481.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABD70198; ABD70198; Rfer_2481.
GeneID3962974.
KEGGrfr:Rfer_2481.
PATRIC23237659. VBIRhoFer131161_2832.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000148074.
KOK05874.
OMASERMAAN.
OrthoDBEOG6G4VQG.

Enzyme and pathway databases

BioCycAFER338969:GHU9-2510-MONOMER.

Family and domain databases

InterProIPR004090. Chemotax_Me-accpt_rcpt.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ21VK5_RHOFD
AccessionPrimary (citable) accession number: Q21VK5
Entry history
Integrated into UniProtKB/TrEMBL: April 18, 2006
Last sequence update: April 18, 2006
Last modified: November 13, 2013
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)