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Q21VH9 (Q21VH9_RHOFD) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Methyl-accepting chemotaxis sensory transducer EMBL ABD70224.1
Gene names
Ordered Locus Names:Rfer_2507 EMBL ABD70224.1
OrganismRhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) [Complete proteome] [HAMAP] EMBL ABD70224.1
Taxonomic identifier338969 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Comamonadaceae › Albidiferax ›

Protein attributes

Sequence length589 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABD70224.1
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular_componentintegral to membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3434 Potential EMBL ABD70224.1
Chain35 – 589555 Potential
PRO_5000110516

Sequences

Sequence LengthMass (Da)Tools
Q21VH9 [UniParc].

Last modified April 18, 2006. Version 1.
Checksum: 8C8C5013FE8FF423

FASTA58961,781
        10         20         30         40         50         60 
MSFNNLRVAT KLWLGVGVII AALAMLIGFS AFKLASLQAD SDAKQSQLNT RVKSVTAWAG 

        70         80         90        100        110        120 
LTETNSIRTM ALITAYDPGV EAALATAIAA TSAKISVVQK SLEAMPLGKD ELAQMQKISG 

       130        140        150        160        170        180 
ARKLMSDARG KALKLKTDGN SEEALATVKE QYTPVVTAYL ATLRELVDME EKAMATFLEE 

       190        200        210        220        230        240 
ASQSRASIAR ILAAFFVLLF VGILIGAGRL IRSIRQPLVQ ANELASSIAK GDLSMQIDTS 

       250        260        270        280        290        300 
RGDEFGELLK SLAAMNESLG RMVHQVRQST DSIATASTEI ATGNNDLAQR TEQTSSNLQS 

       310        320        330        340        350        360 
TASSMDQLTT NVQQSADNAR QASVLAANAS SVAEKGGAVV QQVVSTMEEI NVSSKKIADI 

       370        380        390        400        410        420 
IGVIDGIAFQ TNILALNAAV EAARAGEQGR GFAVVASEVR SLAQRSAEAA KEIKTLIGTS 

       430        440        450        460        470        480 
VDKVASGTKL VSDAGTTMSD IVQSVRKVAD VIGEITAASS EQSTGIAHVN QAIGNLDQMT 

       490        500        510        520        530        540 
QQNAALVEES AAAAESLREQ ASQLAQAVSV FKISGSVVTV QSRPTRDITP RAESLPYKRP 

       550        560        570        580 
QPPAKPQPAS AALGRTRAAV PARKSLALSA GKKPAQAPTQ PADADWETF

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References

[1]"Complete sequence of chromosome of Rhodoferax ferrireducens DSM 15236."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Kiss H., Schmutz J., Larimer F., Land M. expand/collapse author list , Kyrpides N., Ivanova N., Richardson P.
Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 15236 / ATCC BAA-621 / T118.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000267 Genomic DNA. Translation: ABD70224.1.
RefSeqYP_523755.1. NC_007908.1.

3D structure databases

ProteinModelPortalQ21VH9.
SMRQ21VH9. Positions 290-513.
ModBaseSearch...

Protein-protein interaction databases

STRING338969.Rfer_2507.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABD70224; ABD70224; Rfer_2507.
GeneID3962941.
KEGGrfr:Rfer_2507.
PATRIC23237715. VBIRhoFer131161_2860.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000148074.
OMAFLIASIR.
ProtClustDBCLSK951521.

Enzyme and pathway databases

BioCycAFER338969:GHU9-2566-MONOMER.

Family and domain databases

InterProIPR024478. 4HB_MCP.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF12729. 4HB_MCP_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ21VH9_RHOFD
AccessionPrimary (citable) accession number: Q21VH9
Entry history
Integrated into UniProtKB/TrEMBL: April 18, 2006
Last sequence update: April 18, 2006
Last modified: May 1, 2013
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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