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Q21U19

- Q21U19_RHOFT

UniProt

Q21U19 - Q21U19_RHOFT

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Protein
Submitted name:

Methyl-accepting chemotaxis sensory transducer

Gene

Rfer_3023

Organism
Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118) (Albidiferax ferrireducens)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. transmembrane signaling receptor activity Source: InterPro

GO - Biological processi

  1. chemotaxis Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciAFER338969:GHU9-3062-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Methyl-accepting chemotaxis sensory transducerImported
Gene namesi
Ordered Locus Names:Rfer_3023Imported
OrganismiRhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118) (Albidiferax ferrireducens)Imported
Taxonomic identifieri338969 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeRhodoferax
ProteomesiUP000008332: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. integral component of membrane Source: InterPro
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3737 PotentialImportedAdd
BLAST
Chaini38 – 537500 PotentialImportedPRO_5000110605Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi338969.Rfer_3023.

Structurei

3D structure databases

ProteinModelPortaliQ21U19.
SMRiQ21U19. Positions 298-523.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

eggNOGiCOG0840.
HOGENOMiHOG000148074.
OMAiENIRITH.
OrthoDBiEOG6G4VQG.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003122. Chemotax_Me-accpt_rcpt_lig-bd.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF02203. TarH. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q21U19 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MFENIRITHR FIAVVVIFSA AMWTVIGVSY WGQVSARESI KTLHDGAMQP
60 70 80 90 100
ALLADQSIDK IVQNRLQVLL AFQHAPDGPL ASVHEHATSV HTDAIAANRV
110 120 130 140 150
EANRIFKLME SALASPEEKA VFEATQTSRA AWRDKLDQAV NAIQSNNFSP
160 170 180 190 200
ATMTAFLKAS REEGEAAVKS LLVYRDYQVK KANEAYAAAQ SRFRTALIAF
210 220 230 240 250
GLVILIAATP ATLLTFTLLT RMRHGFKLAN ETATAIAGGD LSHVVPHTGR
260 270 280 290 300
DEIGDLLLHM DTMRSKLHHV IGQVRNGSDS IANASTEVAT GTLDLSRRTE
310 320 330 340 350
EQASSLEKTA SASEELTSTV QANADNAAQA NQLAASASDV ASRGGAVVAQ
360 370 380 390 400
VVDTMEAINT SSRKIVDIIA VIDGIAFQTN ILALNAAVEA ARAGEQGRGF
410 420 430 440 450
AVVAAEVRSL AQRSAEAAKE IKTLISDSVQ KVGVGTAQVA QAGATMQEIV
460 470 480 490 500
AGIQRVADIV GEIALASREQ SAGIAQINQA VTHLDGVTQQ NAALVEQTSA
510 520 530
ASNALQDQAR ELAGLAASFK LEQYAGAGSS QALVRLR
Length:537
Mass (Da):56,832
Last modified:April 18, 2006 - v1
Checksum:iFB348E206387581A
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000267 Genomic DNA. Translation: ABD70734.1.
RefSeqiYP_524265.1. NC_007908.1.

Genome annotation databases

EnsemblBacteriaiABD70734; ABD70734; Rfer_3023.
GeneIDi3960370.
KEGGirfr:Rfer_3023.
PATRICi23238793. VBIRhoFer131161_3392.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000267 Genomic DNA. Translation: ABD70734.1 .
RefSeqi YP_524265.1. NC_007908.1.

3D structure databases

ProteinModelPortali Q21U19.
SMRi Q21U19. Positions 298-523.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 338969.Rfer_3023.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABD70734 ; ABD70734 ; Rfer_3023 .
GeneIDi 3960370.
KEGGi rfr:Rfer_3023.
PATRICi 23238793. VBIRhoFer131161_3392.

Phylogenomic databases

eggNOGi COG0840.
HOGENOMi HOG000148074.
OMAi ENIRITH.
OrthoDBi EOG6G4VQG.

Enzyme and pathway databases

BioCyci AFER338969:GHU9-3062-MONOMER.

Family and domain databases

InterProi IPR004090. Chemotax_Me-accpt_rcpt.
IPR003122. Chemotax_Me-accpt_rcpt_lig-bd.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view ]
Pfami PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF02203. TarH. 1 hit.
[Graphical view ]
PRINTSi PR00260. CHEMTRNSDUCR.
SMARTi SM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view ]
PROSITEi PS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of chromosome of Rhodoferax ferrireducens DSM 15236."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Kiss H., Schmutz J., Larimer F., Land M.
    , Kyrpides N., Ivanova N., Richardson P.
    Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-621 / DSM 15236 / T118Imported.

Entry informationi

Entry nameiQ21U19_RHOFT
AccessioniPrimary (citable) accession number: Q21U19
Entry historyi
Integrated into UniProtKB/TrEMBL: April 18, 2006
Last sequence update: April 18, 2006
Last modified: October 29, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3