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Protein
Submitted name:

Methyl-accepting chemotaxis sensory transducer

Gene

Rfer_3023

Organism
Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118) (Albidiferax ferrireducens)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionTransducerPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Methyl-accepting chemotaxis sensory transducerImported
Gene namesi
Ordered Locus Names:Rfer_3023Imported
OrganismiRhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118) (Albidiferax ferrireducens)Imported
Taxonomic identifieri338969 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeRhodoferax
Proteomesi
  • UP000008332 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei12 – 32HelicalSequence analysisAdd BLAST21
Transmembranei196 – 219HelicalSequence analysisAdd BLAST24

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi338969.Rfer_3023.

Structurei

3D structure databases

ProteinModelPortaliQ21U19.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini220 – 272HAMPInterPro annotationAdd BLAST53
Domaini277 – 506Methyl-accepting transducerInterPro annotationAdd BLAST230

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

HOGENOMiHOG000148074.
OMAiSKDRVEY.
OrthoDBiPOG091H0QRR.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
Gene3Di1.20.120.30. 1 hit.
InterProiView protein in InterPro
IPR004090. Chemotax_Me-accpt_rcpt.
IPR035440. Four_Helix_Bundle_domain.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
IPR003122. Tar_rcpt_lig-bd.
PfamiView protein in Pfam
PF00015. MCPsignal. 1 hit.
PF02203. TarH. 1 hit.
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiView protein in SMART
SM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
PROSITEiView protein in PROSITE
PS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.

Sequencei

Sequence statusi: Complete.

Q21U19-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFENIRITHR FIAVVVIFSA AMWTVIGVSY WGQVSARESI KTLHDGAMQP
60 70 80 90 100
ALLADQSIDK IVQNRLQVLL AFQHAPDGPL ASVHEHATSV HTDAIAANRV
110 120 130 140 150
EANRIFKLME SALASPEEKA VFEATQTSRA AWRDKLDQAV NAIQSNNFSP
160 170 180 190 200
ATMTAFLKAS REEGEAAVKS LLVYRDYQVK KANEAYAAAQ SRFRTALIAF
210 220 230 240 250
GLVILIAATP ATLLTFTLLT RMRHGFKLAN ETATAIAGGD LSHVVPHTGR
260 270 280 290 300
DEIGDLLLHM DTMRSKLHHV IGQVRNGSDS IANASTEVAT GTLDLSRRTE
310 320 330 340 350
EQASSLEKTA SASEELTSTV QANADNAAQA NQLAASASDV ASRGGAVVAQ
360 370 380 390 400
VVDTMEAINT SSRKIVDIIA VIDGIAFQTN ILALNAAVEA ARAGEQGRGF
410 420 430 440 450
AVVAAEVRSL AQRSAEAAKE IKTLISDSVQ KVGVGTAQVA QAGATMQEIV
460 470 480 490 500
AGIQRVADIV GEIALASREQ SAGIAQINQA VTHLDGVTQQ NAALVEQTSA
510 520 530
ASNALQDQAR ELAGLAASFK LEQYAGAGSS QALVRLR
Length:537
Mass (Da):56,832
Last modified:April 18, 2006 - v1
Checksum:iFB348E206387581A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000267 Genomic DNA. Translation: ABD70734.1.
RefSeqiWP_011465300.1. NC_007908.1.

Genome annotation databases

EnsemblBacteriaiABD70734; ABD70734; Rfer_3023.
KEGGirfr:Rfer_3023.

Similar proteinsi

Entry informationi

Entry nameiQ21U19_RHOFT
AccessioniPrimary (citable) accession number: Q21U19
Entry historyiIntegrated into UniProtKB/TrEMBL: April 18, 2006
Last sequence update: April 18, 2006
Last modified: September 27, 2017
This is version 64 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported