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Q21TA8 (Q21TA8_RHOFD) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Rfer_3286 EMBL ABD70995.1
OrganismRhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) [Complete proteome] [HAMAP] EMBL ABD70995.1
Taxonomic identifier338969 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeAlbidiferax

Protein attributes

Sequence length499 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABD70995.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3131 Potential EMBL ABD70995.1
Chain32 – 499468 Potential EMBL ABD70995.1
PRO_5000110672

Sequences

Sequence LengthMass (Da)Tools
Q21TA8 [UniParc].

Last modified April 18, 2006. Version 1.
Checksum: 50330053BF609B50

FASTA49952,767
        10         20         30         40         50         60 
MNLIQPDFRA RLVISFGLLL LLIVGLTAFA VSNMGGFNSG AAQFVLLFGF ASLGVGAGLG 

        70         80         90        100        110        120 
WWLNRSMAAA LAQAIGIAKR LAAGDLSEPF DADARGAIGE LQLALQETSA RMFRIVADVR 

       130        140        150        160        170        180 
AGTMAIASTS GLIAADNAAL SSRTESQASA LEETAATMEE LTATVRQNSD NARQASQLAA 

       190        200        210        220        230        240 
TATEFAIKGG SVVGQVVNTM GSIRDSSRKI GDIIGVIDGI AFQTNILALN AAVEAARAGE 

       250        260        270        280        290        300 
QGRGFAVVAA EVRNLAQRSA SAAREIKSLI GDEVDKVNAG NQLVDAAGKT MDEIVTSIKR 

       310        320        330        340        350        360 
VAGIMSEIAS ASVEQSTGID EINLAVIHTD TMTQQNAALV EEASRTAAGL QEQAVALSQT 

       370        380        390        400        410        420 
VSIFNLGARE FGNSDEAVDM VHRAAAFMAT RGRDTFIEEV NKMNKGQFID RDLYISIYSV 

       430        440        450        460        470        480 
AGQCVGHGTN RRLLGVEALT FKDLDGKFFI KDIMSIARRE GAGWVEYKWS NPVTKEPMMK 

       490 
STYFELAADL IIACGTYKT 

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References

[1]"Complete sequence of chromosome of Rhodoferax ferrireducens DSM 15236."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Kiss H., Schmutz J., Larimer F., Land M. expand/collapse author list , Kyrpides N., Ivanova N., Richardson P.
Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 15236 / ATCC BAA-621 / T118.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000267 Genomic DNA. Translation: ABD70995.1.
RefSeqYP_524526.1. NC_007908.1.

3D structure databases

ProteinModelPortalQ21TA8.
SMRQ21TA8. Positions 143-366.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING338969.Rfer_3286.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABD70995; ABD70995; Rfer_3286.
GeneID3962433.
KEGGrfr:Rfer_3286.
PATRIC23239337. VBIRhoFer131161_3662.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000148074.
OMATSAHEIT.
OrthoDBEOG6GXTT0.

Enzyme and pathway databases

BioCycAFER338969:GHU9-3328-MONOMER.

Family and domain databases

InterProIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ21TA8_RHOFD
AccessionPrimary (citable) accession number: Q21TA8
Entry history
Integrated into UniProtKB/TrEMBL: April 18, 2006
Last sequence update: April 18, 2006
Last modified: February 19, 2014
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)